| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_1180 |
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| Symbol | |
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| ID | 5325435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus vannielii SB |
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| Kingdom | Archaea |
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| Replicon accession | NC_009634 |
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| Strand | - |
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| Start bp | 1193243 |
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| End bp | 1195588 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640786864 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_001323690 |
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| Protein GI | 150399923 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.119571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGATT TAATGGTTGC TGAAGCTTAT CAAGGCGATG TAGGAAAAGG AATCGTAAGA
ATTGACCCAT TAACAATGGA AAAGTTATCT TTAAAGCCCG GTGATGCAAT AGAAATTTCT
GGAAAAGAAA AAACCTATGC AACAGTCTGG AGAGGATACA TTGAAGACCA AGGAAAGGGT
ATAATAAGGA TGGATGGTAT TTTAAGACAG AATACCAAAG CAGGAATCGG CGATAAGGTA
AAAATTACTG TAGTAGAAGT AAAAGAAGCT AAAAAAATAA CTTTAGCTCC AATGCAGGCC
GTAAGATTTA GTACTGGCTT TGAAAGTTAC GTTGGAAGTA GGCTAGTTGA ACAAGTTGTA
GATAAAGGTT CAAAAGTAGT AATAGGGGTA CTTGGAACAG CGTTCCCTTT CATTGTAACG
GGCACTACGC CAAAAGGGCC GGTAAAAATT AACGAATACA CCCAAATTGA ACTTAAAACC
GAACCTGTTA CTGAATTAAA AGAAACTAAA GTTCCAAATG TAACATATGA AGATATCGGT
GGATTAAAAG AAGAAGTTAA AAAAATCAGG GAAATGGTTG AACTTCCAAT GCGGTACCCT
GAATTATTTG ATAAACTTGG AATCGAACCT CCAAAAGGAG TTTTACTTGC AGGGCCCCCT
GGAACTGGAA AAACACTACT TGCAAAAGCA GTTGCAAATG AAGCTGGTGC TAATTTCTAC
ACTATTAACG GCCCAGAAAT CATGAGTAAG TACGTTGGAG AAACTGAAGA AAACTTAAGA
AAGATATTTG AAGAAGCAGA AGAAAACTCG CCTTCAATAA TATTTATCGA TGAAATCGAT
GCAGTTGCAC CAAAAAGAGA TGAAGCAAGC GGTGAAGTTG AAAGAAGAAT GGTTGCACAG
CTTTTAACAT TATTAGATGG TCTTGAAAGT AGGGGCCAGG TTGTAATCCT TGCTGCAACT
AATAGACCTG ATTCAATAGA TATGGCGCTT AGAAGACCTG GAAGGCTTGA CCGTGAGCTT
ACAATAGGTA TTCCTGATAG AACTGCAAGA AAAGAAATTC TTCAAATTCA TACAAGAAAT
ATGCCTCTTC AACCAGATTA TGAAAAAAAT AATGTTATTT CAGTATTAAA TGAACTCATT
GGTGAATTAG ATAGAAATAA AATTGAAGAA GTAGTTAAAA AAGTTGAAAA TTCTGCCAAA
GAAGAACTGA TTGAAAAAAT ACTTAAAGAA AACGATTTGG AAGATAAGGT AAAGTTAAAA
CTTAACCAAA TGATGATAAA GGAACTTGCA GATAAAACAC ATGGTTTTGC AGGGGCTGAC
TTAGCAGCAC TTTCAAAAGA AGCTGCGATG AAAACATTGC GAAGAATTTT ACCAGATATA
GACCTTGAAA AGGAAGAAAT TCCAAGAGAG GTTCTTGACA AAATTAAAGT TACAAGAGAC
GACTTTTTTG GCGGATTGAA AGAAGTTGAA CCATCTGCAT TAAGAGAAGT ACTTGTAGAA
GTTCCAAACG TAAGGTGGAA TGATATAGGT GGCCTTGAAG AAATAAAGCA AGATTTAAAA
GAAGCTGTTG AATGGCCAAT TAAAAATAGA GAAATATTTG AACGAATGGG CATAAGGCCT
CCAAAAGGCG TTTTATTATT TGGGCCACCT GGAACTGGAA AAACACTACT TGCAAAAGCA
GTTGCAAATG AAAGCGAAGC AAACTTTATA AGTGTCAAAG GCCCTGAAAT TTTCAGTAAG
TGGGTTGGAG AAAGTGAAAA GGCAATTCGT GAAATATTTA GAAAGGCACG GCAGGCTGCT
CCAACAGTAG TATTCTTTGA TGAAATCGAT TCTGTTGCCC CAAAAAGAGG AATGGACTTT
GGAAGTAGTG GAGTTACTGA AAAGGTCGTA AATCAGCTTT TAACCGAACT TGATGGCCTT
GAAGAACCAA AAGATGTCGT GATAATTGCT GCAACAAATA GGCCCGATAT TTTAGACCAA
GCTTTATTAA GACCTGGAAG ACTTGATAGG ATAGTTTTAG TTCAAGTGCC TGATGAAAAT
GCAAGGTATG AAATATTCAA AGTACATGCA AAATCAATGC CTCTTTCAAA AGATGTTGAT
TTAAAAGCGC TTGCAACCGA AACTAAAGGA TATACCGGTG CGGATATTGA AGCAGTATGT
AGGGAAGCTG CAATGATTGC ACTTAGGGAA GACATTAATT CAAAAGAAGT ATTTTTAAAG
CACTTTAAAG GTGCATTAAA TAGAATTGCA CCATCTGTAA AGGATGATGA CATGGACGCA
TATAAAGACC TTGCAAGAGA ATACGGAAGA AGCATTGAAA GTGAAAAAGA CGAAAATAAA
GAATAA
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| Protein sequence | MVDLMVAEAY QGDVGKGIVR IDPLTMEKLS LKPGDAIEIS GKEKTYATVW RGYIEDQGKG
IIRMDGILRQ NTKAGIGDKV KITVVEVKEA KKITLAPMQA VRFSTGFESY VGSRLVEQVV
DKGSKVVIGV LGTAFPFIVT GTTPKGPVKI NEYTQIELKT EPVTELKETK VPNVTYEDIG
GLKEEVKKIR EMVELPMRYP ELFDKLGIEP PKGVLLAGPP GTGKTLLAKA VANEAGANFY
TINGPEIMSK YVGETEENLR KIFEEAEENS PSIIFIDEID AVAPKRDEAS GEVERRMVAQ
LLTLLDGLES RGQVVILAAT NRPDSIDMAL RRPGRLDREL TIGIPDRTAR KEILQIHTRN
MPLQPDYEKN NVISVLNELI GELDRNKIEE VVKKVENSAK EELIEKILKE NDLEDKVKLK
LNQMMIKELA DKTHGFAGAD LAALSKEAAM KTLRRILPDI DLEKEEIPRE VLDKIKVTRD
DFFGGLKEVE PSALREVLVE VPNVRWNDIG GLEEIKQDLK EAVEWPIKNR EIFERMGIRP
PKGVLLFGPP GTGKTLLAKA VANESEANFI SVKGPEIFSK WVGESEKAIR EIFRKARQAA
PTVVFFDEID SVAPKRGMDF GSSGVTEKVV NQLLTELDGL EEPKDVVIIA ATNRPDILDQ
ALLRPGRLDR IVLVQVPDEN ARYEIFKVHA KSMPLSKDVD LKALATETKG YTGADIEAVC
REAAMIALRE DINSKEVFLK HFKGALNRIA PSVKDDDMDA YKDLAREYGR SIESEKDENK
E
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