Gene Mevan_1049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMevan_1049 
Symbol 
ID5325416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus vannielii SB 
KingdomArchaea 
Replicon accessionNC_009634 
Strand
Start bp1068220 
End bp1069881 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content33% 
IMG OID640786726 
Producttype II secretion system protein E 
Protein accessionYP_001323562 
Protein GI150399795 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.487211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACTGT TTGATAGGAT TCAAAAATCC GATAAACCAG CTATTGCTAA AAAAGATTTA 
GCTGAAAGTA ATATAAACAC CCCAAATATT TACGAAAATA AAGAAAATAG TTTAGAAGAC
ACAAAACAGG AACCTCCCAA AAAAGTTGGT TTTTCGATAT CCCGCGATAT AAAAAAACAA
GAAATAGAAA ATTTTACTAG TGATTCAAGG TCCACTATTT TAGATAAGTA TTTTGTAAGA
GTTGATGAAA TCGATTTTGA TATTATTATC GAAAAAGAAG AAGGAGTTAC AAAGTATAAA
ATACCCGAAA TTACATTAAT GAACACCGCC CTTTCAAAAT TCTCTGAACT GGATATAAAG
ACTATTAAAG CAGAATTATC AGAATCATCA CTACAGAAAT TAGGGCAAAT TCAAGGATAT
TTAAAAAGTT TTTCAGAAAA AAATAACTTA CATTTAAGGG ATATTGAAAT ACTTCATTTA
TCGCACTATT TTTACTTAAT TATTGGAAAA CTTGGACTTT TAGAAATTCC ACTAAATGAT
GATAGTCTAG AAGAATTAAT GGTAAATGGA ATTGATTCTC CAGCATATGT ATTCCATAGA
AAATACCAAA TGTGTGAAAC AAACATACGT TCAGATCGCC ACGAAGCAAC AAGAGTTGTT
GAAAGTATTG CATACCTTGC AGGAAGAACT ATTGATTCTA GAACGCCATT ACTTGACGCT
TTTTTACCTG ATGGAAGTAG AGTAAATGCA ACAATGCAAG ATGTAACTCT TAGGGGGAGT
ACAATTACAA TTCGTAAATT TAGTGCAGAC CCCTTAACAA TTGTTGATTT AATAAGATAT
GGAACTTTTG ATTTAGAACT TGCATCTTTC CTTTGGCAGG CTGTTGAAGG ATATTTTGGT
TCAAAACCAG CAAATACCTT AATTGTTGGT GGTACAGGTT CAGGTAAGAC TACAACATTA
AACGTTGTTT CAATGTTTTC AATGTATAAC GATAGAATTA TCACTGTTGA AGATACGCCA
GAGTTGCAAG TACCGTTAAA TCACGTTATA AAAATGATTA CAAGGCCCGG AAGACCTGGA
ATTCAAGGTT ATGAAATTAC AATGGATGAT TTAATTAAAA ACTCACTTAG AATGAGGCCA
GACCGGATTT TTGTAGGGGA AGTAAGGGGT AGTGAAGCCC ACTCTCTGTT GGTTGCAATG
AATACTGGAC ATGATGGTTG TTCAGGGACT TTACACGCAA ACAGTGCAGA TGAAGCAATA
ATAAGACTTA TTAACCACCC GATGAGTGTT CCAAAGGTTA TGCTTTCTTC AGTTGATTTT
ATTATAAACC AGCAACGAAT TAAGAGAAAT AAGAAAACCA TAAGAAGAAT TTTAGGGGTT
GTTGAAATTG GCGGAAGTGG TGAAAATATT ACCAAAACCG AGTTATTTAA GTACGACGGT
GTAAGTGACA GTGTTGTAAA AACGGGAATT TGTATGTGGG AAGAAGAAGT CTGTGCAATT
GCAGGAATTA CAAGGGATGA ATTAATGGAT GATCGAATAA ATAGAAAAAA AGTATTAAAG
TATATGGTAA ATAACAATAT TAACGGAATT AAAAAGGTAG GGGATGTAAT TAAACAGTAT
CAAGAAAACC CAGAAAATGT TTTAAAGCAT ATACTGGAGT AG
 
Protein sequence
MGLFDRIQKS DKPAIAKKDL AESNINTPNI YENKENSLED TKQEPPKKVG FSISRDIKKQ 
EIENFTSDSR STILDKYFVR VDEIDFDIII EKEEGVTKYK IPEITLMNTA LSKFSELDIK
TIKAELSESS LQKLGQIQGY LKSFSEKNNL HLRDIEILHL SHYFYLIIGK LGLLEIPLND
DSLEELMVNG IDSPAYVFHR KYQMCETNIR SDRHEATRVV ESIAYLAGRT IDSRTPLLDA
FLPDGSRVNA TMQDVTLRGS TITIRKFSAD PLTIVDLIRY GTFDLELASF LWQAVEGYFG
SKPANTLIVG GTGSGKTTTL NVVSMFSMYN DRIITVEDTP ELQVPLNHVI KMITRPGRPG
IQGYEITMDD LIKNSLRMRP DRIFVGEVRG SEAHSLLVAM NTGHDGCSGT LHANSADEAI
IRLINHPMSV PKVMLSSVDF IINQQRIKRN KKTIRRILGV VEIGGSGENI TKTELFKYDG
VSDSVVKTGI CMWEEEVCAI AGITRDELMD DRINRKKVLK YMVNNNINGI KKVGDVIKQY
QENPENVLKH ILE