| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0944 |
|---|
| Symbol | |
|---|
| ID | 5325998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | + |
|---|
| Start bp | 960209 |
|---|
| End bp | 961516 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 640786614 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_001323459 |
|---|
| Protein GI | 150399692 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[COG1992] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTC TTTCGGTTGG AGGTTTTGAC CCAAGTGGAG GTGCAGGAAT AATTGCTGAC
GTAAAAACGA TAAAAGAATT AAATAAAAAC CCGATTTCAA TAATTTCTTC AATAATTCCC
CAAAATAATA ATAAAGTTTA TTTAAAAAGA GATTTGCCAA AAAAAGAAAT AAAATCACAG
TTTGAGGCAG TTTTTGAAGA TTTTAATATT GAATATGTAA AAACGGGAGT AATGACTCGA
GAATGTATTG ATGTTCTTTT AAATTTTTTG AAAGAATATG ATTTAAAAAT AATTTGTGAT
CCGGTTTTAA AGTCAACCAC CAATTTTGAA TTTGTAGATT CCAAACTATT TAAAAAATAC
GTAAAATTTT TTGAAAAATG CTACCTAATT ACACCAAATG CGGGAGAATT TGAAATTTTA
AAAAGATTCC CTGAAAACGG TTTGAAATTA AATTTAGATA AATTAAATAT TCTTATTACT
GGACAAACTG ACGTTTTAAA AGTAAATAAT ATTGAAAATA AAAAAGGAGC TAAAGAGACT
AAAATTCCTG GTGAATATGT AAAAAAAGAA GTTCATGGAA CAGGATGTGT TTATTCTTCT
GCAATAACTT GTTTTTTATC GGAAAGAAAC TCTTTTGAAG AATCCATTAA AAAAGCAAAA
GAATTTGTGC TTGGTTCAGT TATATATGCT GAAAAAACCA AATACGGGTA CAGTTCAAAT
CCAGTGTGGA TAAATAAGGA TTCGGTTGAA AAAAGTGTTT TAAATGCAGT AAATCTGATT
AAAAAAATGG ATTTTTCACT AATTCCTGAA GTTGGTTCAA ATATTGCAGA AAGTACGCTT
TTACCAAAGA GTTATCTTGA TGTATGTGCA ATATCTGGCA AGATTATAAA AAACAGGCTT
GGTGGCCACA GTATTGTTGG AAACGTCCAT TTTGGAGCAT CAAAACATCT TTCACGGATA
ATTCTTTCTG CAAAAGAATT CAATCCTAAA ATCAGGGCCT GTATGAATAT AAAATACGAT
AAACCACTTT TAAAATATTT AAAAGAAAAT CATGCATCAG AATTTAAAAT TTCTTCTTTT
AATAGGAAAG ATGAACTAAA AAATATTTCT ATGGAATTAG AGATTACAGA AGCATTTCAA
AAATACCTTA TGAAAATACC TTATGAAAAT CATTTCGATA CATCTTTAGA TATAATATAT
GATTTAGGTG AAAATGGTAA TGAACCAATG ATTAGAATAT TGGGTCAAAA TTCATTAGAA
ATTGTTGAAA AGCTCTTAAA AATAGAAAAA ATAAGTAAAA ATCTTTAA
|
|---|
| Protein sequence | MNILSVGGFD PSGGAGIIAD VKTIKELNKN PISIISSIIP QNNNKVYLKR DLPKKEIKSQ
FEAVFEDFNI EYVKTGVMTR ECIDVLLNFL KEYDLKIICD PVLKSTTNFE FVDSKLFKKY
VKFFEKCYLI TPNAGEFEIL KRFPENGLKL NLDKLNILIT GQTDVLKVNN IENKKGAKET
KIPGEYVKKE VHGTGCVYSS AITCFLSERN SFEESIKKAK EFVLGSVIYA EKTKYGYSSN
PVWINKDSVE KSVLNAVNLI KKMDFSLIPE VGSNIAESTL LPKSYLDVCA ISGKIIKNRL
GGHSIVGNVH FGASKHLSRI ILSAKEFNPK IRACMNIKYD KPLLKYLKEN HASEFKISSF
NRKDELKNIS MELEITEAFQ KYLMKIPYEN HFDTSLDIIY DLGENGNEPM IRILGQNSLE
IVEKLLKIEK ISKNL
|
|---|
| |