Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mevan_0836 |
Symbol | secD |
ID | 5325049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus vannielii SB |
Kingdom | Archaea |
Replicon accession | NC_009634 |
Strand | - |
Start bp | 865485 |
End bp | 866651 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640786506 |
Product | preprotein translocase subunit SecD |
Protein accession | YP_001323354 |
Protein GI | 150399587 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAC TAAAAGATCC TAAAGTTGCA ATTCTTTTAG TGTTTGTTCT AGCCTCCGTA CTTCTTCTTA CATTCAAAGG ACTTTCCTTT GGTGTAGATT TAAGTGGTGG CTCAACAATA GTATTAAACA CTGAAAAACC ATTAAGTGAC GCTGAAATGG TTTCAGTAAC TGAAATTTTG ACAAGCAGGC TAAATACCAA TGGATTAAGT GATGTTAGAA TTTACCCCCG GGGTAGTGAT GAAATAGTAA TTGAAATACC AAAAAGTGCT GATTTAGAGC GAATTGAACG AATTTTAACT CAGCAAGGGG TATTTATAGC AACAATTGAT AATAAAACTG CATATGTTGG ACAGGATATA TCCTACGTTG AAGAACCAAG AATGACTGCA TCAGGATATG GTGTAGGATT TAGATTATCC TCAGATGGCG CAAATAACTT TGCAGAAGTT GCATACGGAA AAGGGGGGTA TCCTGTAGAA CTATACATGG ATGGAAATCT TGTAAGTGCT CCGATACTTT CTCCCGACCT TGCAGATGGT AGGCCCCATC AAAGTCAGGT AATTACCGTA GCAGGGGCTA GCCCAACAAG AGAGGATATT GAAAAGGCAT GGGTAATATA TACTGCTTTG AAATCTGGTT CGCTTCCAGT AAAAGTTGAA ATAGCATATA TAAGTTCTGT TTCACCAACA TTGGGTGCAG AATTTATAAA AGGGGCATTA ATTGCAGGAT TATTCGCATT CCTTGCAGTT GCAACAGTTA TTTCATTTAG ATACAAAAAC CCGAAAATCG TGCTACCGAT ATTAATAACA GGATTTTCAG AAGTCCTTCT CATACTGGGT TTTGCATCAC TTATTGATTG GAAACTTGAT TTGGCATCAA TTGCAGGGAT TGTTGCAGCA GTAGGTACTG GTGTAGATCA CCAAATTGTA ATTACTGACG AAACAATTGC TGGAGAATCA AAAAAAGTTA CAAAAAATAT TAAAAGAGCT TTCTTTATTA TATTTGGTGC AGCCGCTACA ACCATTGCAG CAATGCTTCC TTTATTTGTA ATGGGTATCG GAATGCTCAA AGGATTTGCG ATAACAACAA TTGCAGGTGT TTTAATGGGT ATATTAATAT CAAGACCTGC ATTTGCTAGA ATAATGCAAT ATGTACTAAA ACACTAA
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Protein sequence | MKLLKDPKVA ILLVFVLASV LLLTFKGLSF GVDLSGGSTI VLNTEKPLSD AEMVSVTEIL TSRLNTNGLS DVRIYPRGSD EIVIEIPKSA DLERIERILT QQGVFIATID NKTAYVGQDI SYVEEPRMTA SGYGVGFRLS SDGANNFAEV AYGKGGYPVE LYMDGNLVSA PILSPDLADG RPHQSQVITV AGASPTREDI EKAWVIYTAL KSGSLPVKVE IAYISSVSPT LGAEFIKGAL IAGLFAFLAV ATVISFRYKN PKIVLPILIT GFSEVLLILG FASLIDWKLD LASIAGIVAA VGTGVDHQIV ITDETIAGES KKVTKNIKRA FFIIFGAAAT TIAAMLPLFV MGIGMLKGFA ITTIAGVLMG ILISRPAFAR IMQYVLKH
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