| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0730 |
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| Symbol | rps5p |
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| ID | 5325893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus vannielii SB |
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| Kingdom | Archaea |
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| Replicon accession | NC_009634 |
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| Strand | + |
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| Start bp | 773012 |
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| End bp | 773689 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640786398 |
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| Product | 30S ribosomal protein S5P |
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| Protein accession | YP_001323248 |
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| Protein GI | 150399481 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01020] ribosomal protein S5(archaeal type)/S2(eukaryote cytosolic type) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.257833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGAAA AAAGAGCTGA AAAAAGAAAA TTCAATACCG ATTCTTGGGA GCCAAAAACC
CAAGTTGGTA GAATGGTTAA GGAAGGAACA ATTTCAGACA TTAGCTACAT TATGGACAAA
GGTCTTCCAT TATTAGAACC TGAAATTGTA GATGTACTTT TACCCGACTT AGAAGAGCAA
GTTTTGGACG TTAAATTAGT TCAAAGAATG CACAAGTCAG GAAGAAGGGC AAGATACAGA
GCAACCGTTG TTGTAGGTAA CAAAAACGGT TATGTTGGAG TAGGCATGGG CAAATCAAAA
GAAGTAGGTC CTGCAATTAG AAAAGCAATT GCTCAAGCAA AATTATCATT AATTAAAGTA
AGAGTAGGTT GCGGTTCATG GGAATGTGGT TGCGGATCCC CTCACTCAAT TCCATTCACA
GCTAAAGGAA CATGCGGTAG TGTTAAGGTT GAATTACTCC CTGCACCAAG GGGTGTAGGT
TTAGTTGCAG GTAACGTTGC AAAAGCAGTT CTAGGCCTTG CAGGTGTAAA GGATGCATGG
ACAACAACTT ACGGAGACAC AAGAACAACC TACAACTTTG CAGAAGCAAC ATTTGATGCA
TTAAACAACT TAAACTTCGT AAGATGCCTA CCTGAACAAA AAGCAAAATT AGGCCTTACA
GAAGGTAGGG TACTCTAA
|
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| Protein sequence | MAEKRAEKRK FNTDSWEPKT QVGRMVKEGT ISDISYIMDK GLPLLEPEIV DVLLPDLEEQ
VLDVKLVQRM HKSGRRARYR ATVVVGNKNG YVGVGMGKSK EVGPAIRKAI AQAKLSLIKV
RVGCGSWECG CGSPHSIPFT AKGTCGSVKV ELLPAPRGVG LVAGNVAKAV LGLAGVKDAW
TTTYGDTRTT YNFAEATFDA LNNLNFVRCL PEQKAKLGLT EGRVL
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