| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0729 |
|---|
| Symbol | rpl18p |
|---|
| ID | 5325892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | + |
|---|
| Start bp | 772419 |
|---|
| End bp | 773000 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640786397 |
|---|
| Product | 50S ribosomal protein L18P |
|---|
| Protein accession | YP_001323247 |
|---|
| Protein GI | 150399480 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0256] Ribosomal protein L18 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.527877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAGA ACGCCAAACA TAGAGTTCCT TTTAGAAGAA GAAGAGAAGG AAAAACCGAC
TTCAGACAAA GATTGGGATT ACTCTTATCT GGAAAACCAA GATTAGTTGC TAGAAAATCC
TTAAATAACA TCATTGCTCA GCTCATGGCA TACGATGAAA AAGGAGACAT CGTATTAGTT
TCAGCACATT CAAGAGAACT CGTTAAAATG GGTTACAAAG GACACTGCGG AAACTTGCCT
GCAGCATACT TAACTGGTTT ATTGTTAGGT AAAAAAGCAG TTGAAGAAGG ACTTGAAGAA
GCAATTTTGG ACAAAGGTCT TCATAGGGCT ACGAAAGGAG CAGCAATTTT TGCTGTTTTA
AAAGGTGCAC TCGACGCAGG TATGGATATT CCATGCGGTG AAGAGATCAT TGCTGATGAA
GAAAGGTTAA ACGGAACACA TATCAAACAA TACGCAGAAC TCTTAAAAGA AGATGAAGAA
GCGTACAAAA AACAGTTCTC AAAATATTTA GAAAAAGGAT TAAATCCAGA AGACTTGCCA
GAACACTTTG AAGAACTGAA AGGAAAAATC CTTAACTTAT AA
|
|---|
| Protein sequence | MAQNAKHRVP FRRRREGKTD FRQRLGLLLS GKPRLVARKS LNNIIAQLMA YDEKGDIVLV
SAHSRELVKM GYKGHCGNLP AAYLTGLLLG KKAVEEGLEE AILDKGLHRA TKGAAIFAVL
KGALDAGMDI PCGEEIIADE ERLNGTHIKQ YAELLKEDEE AYKKQFSKYL EKGLNPEDLP
EHFEELKGKI LNL
|
|---|
| |