| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0673 |
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| Symbol | |
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| ID | 5325060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus vannielii SB |
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| Kingdom | Archaea |
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| Replicon accession | NC_009634 |
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| Strand | + |
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| Start bp | 722920 |
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| End bp | 725589 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640786341 |
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| Product | DNA-directed RNA polymerase subunit A' |
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| Protein accession | YP_001323191 |
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| Protein GI | 150399424 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02390] DNA-directed RNA polymerase subunit A' |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.657483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGAT TTGATGTTCC AAAGGAAATC GGAGATATTA CATTTGGATT GCTCTCTCCA
GAACAGATAA GGACAATGTC TGTTGCAAAA ATCGTTACAG CAGATACTTA TGATGACGAT
GGATATCCAA TTGATGGCGG ACTAATGGAT ACAAGATTAG GTGTTATTGA CCCAGGTTTA
GTTTGTAAAA GTTGTAGTGG GAGAGTTGGA ACGTGTCCAG GGCATTTTGG ACATATTGAG
CTTTCAAAAT CAGTTATTCA TATTGGTTTT GCAAAAGATA TTTATAAACT TTTAAAAGCA
GTTTGTCCAC ACTGCGGTAA AGTTACGGTT ACCGAAATAA AACGGGATGA ATATTTAGAA
AAAATGCTAA AACTTGAAGA AGACGGTGGA GACCCATGGA CTCTTTCCGA TGACCTGCTA
AAAGAAGCTG CAAAAAGTAG TGTTTGCCCT TCCTGCGGTG AAGTAAAATA TGATATAAAA
TATGACAAAC CAACTACCTA CCACCAGTTA GACGGTAAAT CACAAAAACA GCTTACATCA
TCAGAAGTAA GGGAAATTTT AGAAAAAATT CCAAATGAAG ACTGTAAACT TCTTGGAATA
AATTCAAGAG TTGCAAGACC TGAATACATG GTTTTAACTG TACTTCCAGT CCCCCCGGTA
ACGGTTAGGC CCTCTATAAC GCTAGAAAGT GGTGAAAGAA GTGAAGATGA TTTAACCCAC
AAGTTAGTTG ATATCATTAG AATTAACCAG CGTTTAGAAG AAAACATCAA CGGTGGTGCT
CCAAACTTAA TTATTGAAGA CTTATGGGAT CTTTTACAGT ACCACATAAA TACGTACTTT
GATAACGAAG CACCAGGTAT CCCTCCAGCA AGGCACAGAA GTGGAAGGCC ACTTAGAACT
CTTGCTCAAA GATTAAAAGG AAAAGAAGGA AGATTTAGAC ACAATTTAGC TGGTAAAAGG
GTAAACTTTT CAGCTAGAAC TGTTATTTCA CCAGACCCAA GACTTAGTAT TAATGAAGTT
GGAATTCCAG AATTAATTGC AAAAGAACTA ACGGTTCCAG AAAAGGTTAC GCCATATAAC
ATTGAAAGAA TCAGAAAATT AATTGAAAAT GGTTCTGATA AACATCCTGG TGTAAACTAC
GTAATTAAGA AAGTTAAAAC TAAAGATGGT AAAGAAGAAG AATATAAGAT TAAAATTACT
GACACCAACA AAAAAATGTG GGTAGAAAAT ATTGTTGATG GAATGGTCGT TGAAAGACAT
TTGGGGGATG GTGACGTCGT TTTATATAAC CGACAGCCAT CTTTACACAG GATGTCTATC
ATGGCACACA AAGTAAAAGT TCTCCCATAT AGGACTTTTA GGCACAACCT TTGTGTATGT
CCGCCATATA ACGCAGACTT TGACGGTGAC GAAATGAACG TTCACGTTCC ACAGTCTGAG
GAAGCAAGAG CGGAAGCTGA AACACTAATG CTTGTTGAAA AACATATTAT TTCCCCAAGA
TACGGTGGAC CAATTATCGG TGCAATTCAC GACTTCGTTT CGGGAGCATA TGTTCTTACA
AGTTCGAATT TTATAAAAGA TGAAGCATTA ACTCTTCTTA AAAGTTCAGG ATTTGGTTCA
GAACTTGGAG AGCCGGACTT TGTTGAAAAT GGAATAGAAT ACTACAGCGG AAAATCATTA
TTTAGTAAAA CTCTTCCAAA AGGACTAAAT TTACAGTACA AAGCTAAAGT CTGTAAAAAG
TGTGTTCAAT GTAAAAGGGA AGAATGTGAA AACGATGCGT TTGTTATTAT TAGAAATGGC
AGACTAGTTC AAGGAGTAAT CGATAAAAAC GGTTTTGGTG CGGAAACAGG TGTCGTTTTA
AACACAATCG TTAAAGACTT TGGTTCAGAA GATGCAAGAA CATTCCTTGA TTCAGCAACG
AAAATGTCAG TAAAATCGAT GATGTTAAGG GGATTTACAA CCGGGATTGA CGATGAAGAT
ATTCCTTCTG AAGCTATTCA AGAAATTCAA GATTTATTGG ACAAAGCAGA AAGTGACGTT
CAGGAAATCG TTGAAAGATA TGAAGGTGGA ACGCTAGATC CACTTCCAGG AAGAGGCATT
GAAGAATCAA GGGAAGCCTA CATCATGCAA ATTCTTGGTA AGGCAAGAGA CGATACAGGT
AAAGTTGCAG AAAAATACTT AAGTAAAGAA AATCATGCTG CCTTGATGGC AAGAACCGGT
GCAAGAGGGT CTCTTCTTAA CATTACTATG ATGGCCGCAA GTGTCGGTCA GCAGTCTGTT
AGAGGGGGCA GGGTATTTAG AGGATACCGT GGAAGGACGC TCCCCCACTT TGGAGAGGGA
AGTTTAGATG CAAAATCACA CGGGTTTGTT AGAAGTTGCT ATAAAAAAGG ATTAGCGCCT
ACAGAATACT TTTTCCACGC AATGGGTGGT AGAGAAGGTT TAGTTGACCA AGCAGTAAGA
ACTGCACAGT CAGGTTACAT GCAGAGAAGG CTTGTAAATG CATTACAGGA TATAAAAGCA
GAATATGATG GTACTGTAAG GGATTCACGA GGAATTATTG TTCAATTTAA TTACGGGGAA
GATTTAGTAG ATCCTTCAAA AGCAGACCAC GGAAAAGGCG TAGATTTAGA TAAAGTATTT
ACAAAAGTCA TTTCAAAATA TGAAAATTAA
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| Protein sequence | MDRFDVPKEI GDITFGLLSP EQIRTMSVAK IVTADTYDDD GYPIDGGLMD TRLGVIDPGL
VCKSCSGRVG TCPGHFGHIE LSKSVIHIGF AKDIYKLLKA VCPHCGKVTV TEIKRDEYLE
KMLKLEEDGG DPWTLSDDLL KEAAKSSVCP SCGEVKYDIK YDKPTTYHQL DGKSQKQLTS
SEVREILEKI PNEDCKLLGI NSRVARPEYM VLTVLPVPPV TVRPSITLES GERSEDDLTH
KLVDIIRINQ RLEENINGGA PNLIIEDLWD LLQYHINTYF DNEAPGIPPA RHRSGRPLRT
LAQRLKGKEG RFRHNLAGKR VNFSARTVIS PDPRLSINEV GIPELIAKEL TVPEKVTPYN
IERIRKLIEN GSDKHPGVNY VIKKVKTKDG KEEEYKIKIT DTNKKMWVEN IVDGMVVERH
LGDGDVVLYN RQPSLHRMSI MAHKVKVLPY RTFRHNLCVC PPYNADFDGD EMNVHVPQSE
EARAEAETLM LVEKHIISPR YGGPIIGAIH DFVSGAYVLT SSNFIKDEAL TLLKSSGFGS
ELGEPDFVEN GIEYYSGKSL FSKTLPKGLN LQYKAKVCKK CVQCKREECE NDAFVIIRNG
RLVQGVIDKN GFGAETGVVL NTIVKDFGSE DARTFLDSAT KMSVKSMMLR GFTTGIDDED
IPSEAIQEIQ DLLDKAESDV QEIVERYEGG TLDPLPGRGI EESREAYIMQ ILGKARDDTG
KVAEKYLSKE NHAALMARTG ARGSLLNITM MAASVGQQSV RGGRVFRGYR GRTLPHFGEG
SLDAKSHGFV RSCYKKGLAP TEYFFHAMGG REGLVDQAVR TAQSGYMQRR LVNALQDIKA
EYDGTVRDSR GIIVQFNYGE DLVDPSKADH GKGVDLDKVF TKVISKYEN
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