Gene Mevan_0672 details

Gene Information

• Locus tag: Mevan_0672
• ID: 5325059
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus vannielii SB
• Kingdom: Archaea
• Replicon accession: NC_009634
• Strand: +
• Start bp: 721027
• End bp: 722862
• Gene Length: 1836 bp
• Protein Length: 611 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640786340
• Product: DNA-directed RNA polymerase subunit B'
• Protein accession: YP_001323190
• Protein GI: 150399423
• COG category: [K] Transcription
• COG ID: [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit
• TIGRFAM ID: [TIGR03670] DNA-directed RNA polymerase subunit B

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAAAAAC AGGCAAACGT TTACGTCAAT GGGAAATTGA TAGATACTTC AAAAGACCCT 
GAAAACCTCG TTAAATCATT AAGGATACAG AGAAGAAGCG GAAAATTATC TCCAAACACA 
TCTATTTCAT TTAATGAAGA AAGTAACGAT ATTCATATAT CAACCGATGG CGGTAGGGCT 
GTAAGGCCGC TAGTGGTAGT TGAAAACGGG TTTTCAAAAT TAACAAACGA ACTTTTAGAA 
AAAGTTAATA ATAATGAACT TACTTTTGAA TACCTTGTAA AAACGGGCGT TATTGAGTTT 
TTAGATGCTG AAGAAGAAGA AAACGCAAGA ATTGCAATGT ACAATGACGA AATTACTTTT 
GAAAATACGC ATGTTGAAAT TGACCCACTT GTAATTTTAG GTATCGGTGC AGGTGTTGCA 
CCTTATCCTG AACATAACTC AGCCCCAAGG ATTACGATGG CTGCTGCAAT GGGTAAACAA 
TCATTAGGAA TTCCAATGGC GAATATAAAG TGGAGAATGG ATACAAGGGG ACATCTACTT 
CACTACCCTC AAGTTCCATT GGTTAGAACA AAACACCAGG AAATATTAGG ATTTGATAAA 
AGGCCTGCGG GACAAAATTT CGTTGTAGCA GTTATGAGTT ACGAAGGATA CAACATGGAA 
GATGCATTCG TAATTAATAA AGCATCTCTT GAAAGGGGCC TTGGAAGGAG TACATTTTTT 
AGAAGTTATG AAAGCTTTGA AAAAAGATAC CCTGGTGGAC AACTTGATAA ATTCGAAGTT 
CCTGAAAAGG GCGTTAGGGG ATATAGGGCT GAAGAAGCAT ACCGAAATTT GGGAGATGAT 
GGTTTAATAG ACTTAGAATC TGAAGTAAGG TCTGGAGATG TAATATTGGG AAAAACTTCA 
CCTCCAAGGT TTTTAGAAGA ACAAGAAATA ACCCTTCAAA CAAAATCACA GAGAAGAGAC 
ACATCCGTTA CAATTAGACA CGGTGAAGAA GGAGTAGTTG ACCTCGTAAT TTTAAGTGAA 
ACTAAGGAAG GAAATAGACT TGGAAAAGTT AGAGTTAGAG ATTTAAGAGT TCCCGAATTT 
GGAGATAAAT TTGCTTCAAG ACACGGACAA AAAGGAGTTA TAGGGCTCGT TGTACCCCAG 
GAAGATTTAC CATTTACCGA AGATGGAGTA ATTCCTGATT TAATTATTAA CCCACACGCA 
ATTCCCTCAA GAATGACTAT TGGACAGGTT CTTGAAATGA TTGGCGGTAA AGTTGGTTCA 
TTAGAATGTA GACGAGTTGA CGGAACTATA TTCAGTGGTG AAGGAGAATG GGCTCTAAGA 
CATGCTCTTG AAAACTACGG GTTTACACAT AGTGGTAAAG AAACTATGTA TGATGGAAAA 
ACAGGCCGAA AATTAGAATG TGAAATATTT GTTGGAGTTG CATATTACCA AAAACTACAC 
CACCTTGTTG CAGGGAAAAT CCACGCAAGA AGTAGGGGCC CAATTCAAGT CCTTACACGG 
CAACCTACTG AAGGTAGAGC TAGGGAAGGA GGTCTCAGGT TTGGAGAAAT GGAGAGAGAC 
GTTCTTGTTG CCCACGGTGC TGCACTACTA CTTAAAGAAA GATTACTCGA TGAATCAGAC 
CCGCATGAAG ATTATGTATG TGCAAAGTGT GGTGAAATCG CAATCTTTGA TTACAAAAGA 
GGCATGAAAT TCTGTCCAGT ATGTGGCGAA TCAGAAGACA TTCAGGATAA TAGAAAAATT 
CCGCCTGTAA AAATTGCTTA TGCATTCAAA TTACTATTGG ATGAACTTAA GAGTATGGGA 
ATCGATCCAA AATTAAAATT AAAAGATAGA GCATAA 

 

Protein sequence

MEKQANVYVN GKLIDTSKDP ENLVKSLRIQ RRSGKLSPNT SISFNEESND IHISTDGGRA 
VRPLVVVENG FSKLTNELLE KVNNNELTFE YLVKTGVIEF LDAEEEENAR IAMYNDEITF 
ENTHVEIDPL VILGIGAGVA PYPEHNSAPR ITMAAAMGKQ SLGIPMANIK WRMDTRGHLL 
HYPQVPLVRT KHQEILGFDK RPAGQNFVVA VMSYEGYNME DAFVINKASL ERGLGRSTFF 
RSYESFEKRY PGGQLDKFEV PEKGVRGYRA EEAYRNLGDD GLIDLESEVR SGDVILGKTS 
PPRFLEEQEI TLQTKSQRRD TSVTIRHGEE GVVDLVILSE TKEGNRLGKV RVRDLRVPEF 
GDKFASRHGQ KGVIGLVVPQ EDLPFTEDGV IPDLIINPHA IPSRMTIGQV LEMIGGKVGS 
LECRRVDGTI FSGEGEWALR HALENYGFTH SGKETMYDGK TGRKLECEIF VGVAYYQKLH 
HLVAGKIHAR SRGPIQVLTR QPTEGRAREG GLRFGEMERD VLVAHGAALL LKERLLDESD 
PHEDYVCAKC GEIAIFDYKR GMKFCPVCGE SEDIQDNRKI PPVKIAYAFK LLLDELKSMG 
IDPKLKLKDR A