Gene Mevan_0630 details

Gene Information

• Locus tag: Mevan_0630
• Symbol: rps13p
• ID: 5324687
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus vannielii SB
• Kingdom: Archaea
• Replicon accession: NC_009634
• Strand: +
• Start bp: 686509
• End bp: 686958
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640786297
• Product: 30S ribosomal protein S13P
• Protein accession: YP_001323148
• Protein GI: 150399381
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0099] Ribosomal protein S13
• TIGRFAM ID: [TIGR03629] archaeal ribosomal protein S13P

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACTCAGA CAGAATTCAG ACACAGAATC AGAATATCAA AAACAGACCT TGAAGGTAAA 
AACCCTCTCG AATACGCACT ACAAGAAGTG AAAGGTATCG GTAGGGCTAT GGCTAAGGCA 
TTAATCAGAG TTACCGAATT AGACCCTAAA CAACAGGCAG GTTACTTAGC AGATGAGGAT 
GTTTTAAAAA TTGAATCAGT TTTAGAAGAC CCTGCAAAAC ACGGTATTCC ATCATGGATG 
TTCAACAGGA AAAAAGATGT CTACACGGGA CTCGACAAAC ACCTTATCGA AACCGACCTC 
GTACTCGCAG TACAAGAAGA CATTGGAAAC ATGAAAAAGA TCAGATGCTA TAGAGGTATC 
AGACACGAGT TAAGATTACC ATGTAGAGGA CAGAGAACCA GAGGTTCTTT CAGAAAAGGA 
AGTACAATGG GAGTTAAGAG GAAGAAGTAA 

 

Protein sequence

MTQTEFRHRI RISKTDLEGK NPLEYALQEV KGIGRAMAKA LIRVTELDPK QQAGYLADED 
VLKIESVLED PAKHGIPSWM FNRKKDVYTG LDKHLIETDL VLAVQEDIGN MKKIRCYRGI 
RHELRLPCRG QRTRGSFRKG STMGVKRKK