Gene Mevan_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMevan_0454 
Symbol 
ID5325328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus vannielii SB 
KingdomArchaea 
Replicon accessionNC_009634 
Strand
Start bp507772 
End bp508305 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content31% 
IMG OID640786117 
ProducttRNA-splicing endonuclease subunit alpha 
Protein accessionYP_001322973 
Protein GI150399206 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1676] tRNA splicing endonuclease 
TIGRFAM ID[TIGR00324] tRNA intron endonuclease 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCAA AACCTAAAAA AACTATTCCT GCAAAGCTTT CAGATGAAAG AATTGTAATC 
TATGATAAAG ATGGAATATC TCGACTAAAT GAAAAAAGGT ATGGGGAACT TCATGAAAAC
TTTTTATCAC TTTCTTATGT TGAAGCCCTT TATTTAGTAG CTAAAGACTG GGTATTAATT
AGGGATAAAA AAAATAAAAT TCTTTCTTTT GAAGAACTGC ATGAAATTGC ACATGTAATT
GATAAAAAAT TATGTATTAG GTATTTGGTG TATAAAGACC TTAGAAATAG GGGATATACG
GTAAGAACTG GCTTAAAATA TGGTTCTGAC TTCAGACTTT ATGAAAGAAG CAACATTGAT
GAAGTACATT CCAAATATCT TGTAAAAGTA TTTTCAGAAG AAATACCCTG CGAAATTTCT
GAAATTACAG GATTCGTTAG GGTTGCACAT TCTGTTAGAA AAGAACTAGT AATTGCTATT
GTTGACGCGG ATGGAAGCGT TGTTTACTAT AATATGGGTT ATTTAAAGCT TTAG
 
Protein sequence
MMAKPKKTIP AKLSDERIVI YDKDGISRLN EKRYGELHEN FLSLSYVEAL YLVAKDWVLI 
RDKKNKILSF EELHEIAHVI DKKLCIRYLV YKDLRNRGYT VRTGLKYGSD FRLYERSNID
EVHSKYLVKV FSEEIPCEIS EITGFVRVAH SVRKELVIAI VDADGSVVYY NMGYLKL