Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mevan_0454 |
Symbol | |
ID | 5325328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus vannielii SB |
Kingdom | Archaea |
Replicon accession | NC_009634 |
Strand | + |
Start bp | 507772 |
End bp | 508305 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640786117 |
Product | tRNA-splicing endonuclease subunit alpha |
Protein accession | YP_001322973 |
Protein GI | 150399206 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1676] tRNA splicing endonuclease |
TIGRFAM ID | [TIGR00324] tRNA intron endonuclease |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGGCAA AACCTAAAAA AACTATTCCT GCAAAGCTTT CAGATGAAAG AATTGTAATC TATGATAAAG ATGGAATATC TCGACTAAAT GAAAAAAGGT ATGGGGAACT TCATGAAAAC TTTTTATCAC TTTCTTATGT TGAAGCCCTT TATTTAGTAG CTAAAGACTG GGTATTAATT AGGGATAAAA AAAATAAAAT TCTTTCTTTT GAAGAACTGC ATGAAATTGC ACATGTAATT GATAAAAAAT TATGTATTAG GTATTTGGTG TATAAAGACC TTAGAAATAG GGGATATACG GTAAGAACTG GCTTAAAATA TGGTTCTGAC TTCAGACTTT ATGAAAGAAG CAACATTGAT GAAGTACATT CCAAATATCT TGTAAAAGTA TTTTCAGAAG AAATACCCTG CGAAATTTCT GAAATTACAG GATTCGTTAG GGTTGCACAT TCTGTTAGAA AAGAACTAGT AATTGCTATT GTTGACGCGG ATGGAAGCGT TGTTTACTAT AATATGGGTT ATTTAAAGCT TTAG
|
Protein sequence | MMAKPKKTIP AKLSDERIVI YDKDGISRLN EKRYGELHEN FLSLSYVEAL YLVAKDWVLI RDKKNKILSF EELHEIAHVI DKKLCIRYLV YKDLRNRGYT VRTGLKYGSD FRLYERSNID EVHSKYLVKV FSEEIPCEIS EITGFVRVAH SVRKELVIAI VDADGSVVYY NMGYLKL
|
| |