| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0410 |
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| Symbol | |
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| ID | 5325612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus vannielii SB |
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| Kingdom | Archaea |
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| Replicon accession | NC_009634 |
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| Strand | - |
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| Start bp | 462664 |
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| End bp | 464100 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640786074 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001322930 |
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| Protein GI | 150399163 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.13343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAATG AAAAAGCCAT AATCATTGGT GCAGGGGGCG CTGGAAAAGA ACTTTTGAAT
GAATTTATAG CTGGTTCATA TCCAATAAAT ATTTTGGGAT TTATAGATGA TAACGTAACT
GAATCAATAA AAAGTTTCCC AATCCTCGGT AAAATTGAAA ATTTAAAACA AATTATACCA
AAATATGGTA TAAAAATAGT TTTTATTGCA ATGCCTGCTA CTGAAGGTGA ATTACTTAAA
AAAATTTATC TTGAATGTAT TAAGTTTCCA GTTAAAATTA AATTAATACC AAGATATTCT
GAAATATTAT TAAATAGGGT TAATCTAACC CAATTAAGGG AAATTTCTGT TGAAGACATT
ATTGGAAAAA AGGTTACAAA AAAAATGTTT GAAAATATCT CAAAAAAGGT TGAGGGTAAA
ACATTTATTG TCTTTGGTGC TGCTGGATCT ATTGGCTCAA AATTATGTCA ACAAATTGCA
AGTTTATGCC CTAAAAAATT AATCATGGTC GACTGGTCAG AAAATGGAAT GTTTTATCTA
GAAGACAAGA TAAATAAAAT TATTAAGACA AATGATAAGG TTTCATTAAA TAATTTTTCA
TACTATATTG GAAATATTCA AGATGAAGTC CGCATGAATC AAATAATTGG TAGTGAAAAA
CCAGACGTAA TTATTAATGC TGCAGCATAT AAACACGTTC CACTAATGGA ATTAAATTAC
TATGAAGCTA TCAAAAATAA TGTAATGGGT TCAAAAAATT TATATGAAAT TGCAATCAAA
CACCAAGTAA AAAATTTTAT ATTAATATCT TCAGATAAGG CTGTAAATCC GACAAATATT
ATGGGCGTTA CAAAAAGAAT AACTGAAAAA ATGATGCATT ACTATGCATC ACTAGACAAT
TCAAAAACTT CCTTTTTAGC CGTTAGATTT GGAAATGTAA TAAATAGTAA TGGAAGTGTT
ATACCTACAT TTCAAAAACA AATTAGGGAA GGCCGTATAA CAATAACTCA TAAAGATATT
ATTCGGTATT TCATGAGTAT AGATGAAGCT GTTTATTTGA TATTACAGTG TTGGGTTCAA
GGAACTAATG ATGAAATATT TGTTTTAGAT ATGGGGGAAC CAATTAAGAT TATTGACCTT
GCAACACTAA TGATAAAAAT TGCAGGTTTG GAATTAGATA AAGATGTTAA ATTAGAATTT
ATCGGATTAA GACCTGGGGA AAAACTATAT GAAGAACCGT TAACAAAAAT TGAAGAAACG
TTGGCAACAA AAAACGACAA AATTTATATT TTAAAAAGAG ATGAAGAATT TGACCATAAA
GAATTTATCG ATACAGTAAC CCAATTAGTT AACGTTAGTG GGGAAAAAAC ATTTGATGAA
GTAAAACCGA TATTGAAAAA ATTAGTGCCT ACTTATAAAG AATTCGATAT GGTGTAA
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| Protein sequence | MDNEKAIIIG AGGAGKELLN EFIAGSYPIN ILGFIDDNVT ESIKSFPILG KIENLKQIIP
KYGIKIVFIA MPATEGELLK KIYLECIKFP VKIKLIPRYS EILLNRVNLT QLREISVEDI
IGKKVTKKMF ENISKKVEGK TFIVFGAAGS IGSKLCQQIA SLCPKKLIMV DWSENGMFYL
EDKINKIIKT NDKVSLNNFS YYIGNIQDEV RMNQIIGSEK PDVIINAAAY KHVPLMELNY
YEAIKNNVMG SKNLYEIAIK HQVKNFILIS SDKAVNPTNI MGVTKRITEK MMHYYASLDN
SKTSFLAVRF GNVINSNGSV IPTFQKQIRE GRITITHKDI IRYFMSIDEA VYLILQCWVQ
GTNDEIFVLD MGEPIKIIDL ATLMIKIAGL ELDKDVKLEF IGLRPGEKLY EEPLTKIEET
LATKNDKIYI LKRDEEFDHK EFIDTVTQLV NVSGEKTFDE VKPILKKLVP TYKEFDMV
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