| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0323 |
|---|
| Symbol | |
|---|
| ID | 5325947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | - |
|---|
| Start bp | 373646 |
|---|
| End bp | 374017 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640785987 |
|---|
| Product | blue (type1) copper domain-containing protein |
|---|
| Protein accession | YP_001322844 |
|---|
| Protein GI | 150399077 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3794] Plastocyanin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00521297 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGGGGGG GAACTGTGGA AAAATATATA CTTTTATTTT CAGTAGTTTT GGCACTTGTA
TTTTTAGGGG TGCTTGAATT GAATGAAACA AATGAAAGTC CCTGTGATAG CATAATAAAT
ACCAGTGCTT TTATTTTAAT TGAAAATTTC TCATATAATC CTGACAATAT TACTTTAAAA
AAAGGCACTA ATGTAAGGTG GCTACAAAAA GACAGTGTAA GACACTCTGT AACCTCTGAT
GAAGGCATTT TTGATTCAGG ACTTCTTTCA AAGGGCGTAT CTTTTGAATA TACCTTCTAT
GATGTAGGAG TATATAATTA TCATTCAAAG CCTCACCAGT ATGTTAAGGG AACAATTTTT
ATAGTGGACT GA
|
|---|
| Protein sequence | MGGGTVEKYI LLFSVVLALV FLGVLELNET NESPCDSIIN TSAFILIENF SYNPDNITLK
KGTNVRWLQK DSVRHSVTSD EGIFDSGLLS KGVSFEYTFY DVGVYNYHSK PHQYVKGTIF
IVD
|
|---|
| |