| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0265 |
|---|
| Symbol | |
|---|
| ID | 5324494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | + |
|---|
| Start bp | 308541 |
|---|
| End bp | 311573 |
|---|
| Gene Length | 3033 bp |
|---|
| Protein Length | 1010 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640785929 |
|---|
| Product | type III restriction protein res subunit |
|---|
| Protein accession | YP_001322786 |
|---|
| Protein GI | 150399019 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.268157 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATTATA AAGAAAAGCG GTTTGAACAG GATATCGAAA GCTACATGTT AAATTATGGT
GGATACGCCA AAGGTGACAT GTCAACGTAT GATGCAGAAA ATGCAATTGA CTTACCAAAA
CTTGTATCGT TTATCAAATC AACACAGGAA AAAGAGTGGG CTAAATACGA GCGAAACTAC
GGAATCGATT CAGAACAAAA ACTACTCAAA CGATTCAACG AGGAAGTTAA CACGCACGGA
CTTTTACATG TTCTAAGAAA TGGAATCAGT GACCGTGGTG CTAAGCTCAA AGTTTGTGCA
TTCAAACCGG AATCCAACTT AAACGCTGAA CTTGTAAGTA GGTATGAAAA TAACATCCTA
ACCGTTACAC GACAGTTTGC ATACTCAACG GAAAACCGAA ACACGATCGA CATGGTATTG
TCACTTAATG GTATTCCTAT CGTTGCAATT GAACTCAAAA ACCAGATCAC CGGTCAATCA
ATCGAAAATG GTAAGAAACA ATATATTTAC GACCGAAATC CAAAAGAACT GTGCTTTCAC
TTTAACAAGC GATTTTTAGT GTACTTTACA GCGGACCTCT TCGAAGTTTC AATGGCAACG
AAGCTTTCTG GAAAGGATAC GACATTTTTA CCATTTAACC AAGGTTCAGG CGGTGCTGGA
AATGTCGGTG GTGCCGGTAA CCCTGAAAAC ACTAACGGAT ACACTACATC GTATCTATGG
GAATCCGTAC TCACTAAAGA TTCGTTAATG AACATCATCC AGCGATTCTT AAACGTAAGA
GTTGAAGAAA CAAAGATAAC GAAAAACGGT AAGGAAGTAA AGAAAACGAG TACCAAGTTA
ATTTTCCCAA GATATCACCA GCTTGACGTT GTAACAAAGC TTGTTGATGA CGTTAAAAAG
AATGGATCAG GTAACAGCTA CTTAATTCAA CATTCGGCAG GTTCCGGTAA AAGTAACAGT
ATTGGCTGGA TTGCATACCG ACTTGCAAGC CTTCACGATG AAGCTGACAA AAACATTTTC
ACATCCGTTA TCGTAGTAAC TGATAGGAAG GTACTCGACA ACCAGTTACA GGATACCATA
TCAAGTTTTG ATCACAAATT TGGGTTAATC GAAACTATCG ATGACAAAAA GACATCAAAG
GACTTAAAAG ATGCGATAAA CAGCGGTAAA AAGATTATCG TAACAACACT TCAAAAGTTC
CCTGTGATAT ACGAAGAAGT TGAAAGTAAC CACGGCAAGC GATTTGCAGT GATTATCGAC
GAAGCTCACT CGAGCCAGAC TGGAAGAAGT GCACAGAAAC TTAAAATTGC ACTTGCAGAC
AACAAAGACG CGCTTGAAGA ATATGCAAAA ATCGAAGGCG ATGTGGAAAA CTCAACTGAT
GACTTTGAGG ATAAGCTTGT AAAAGAGTTA ACGTCACACG GTAGGCATAA AAACCTTTCA
TTCTTCGCAT TTACTGCAAC ACCAAAACAA AAAACGTTAG AAATGTTTGG TAAGCGTTAC
ACTGACGGGA CATTCCATCC GTTCCACATT TATTCGATGA AACAGGCAAT TGAAGAAGGA
TTTATACTTG ATGTGCTCAA AAACTACATG ACTTATAAAA CATGTTACAA GATTGCTAAA
TCCACACCCG ATAACCCGGA ATTACCCGAA AGTGAAGCGA GAAAAGCAAT CGCTAGATAT
GAATCACTAC ATCCGTATAA CTTGCAGCAA AAAACTGCAG TGATGGTTGA GCAGTTTCGT
GAAGTTACTT CAAAGAAAAT TAACGGTCAG GCCAAAGCAA TGATTGTAAC ACCTTCAAGG
CTTCACGCTG TTAGGTACTA CAACGAATTT AAGAGATATA TTAAGCATAA GGGCTACAAC
GATCTCGATG TCCTTATCGC GTTTTCTGGA ACTGTAACTG ATACTGATGG TACAGAATAT
ACGGAAAGTG GAATGAATAA GACTAAAGCA GGTAACAAAA TTAGCGAAAA GCAGCTCCCC
GAAGTATTTC ATGGTGACGA ATTTAACATG TTAATCGTTG CCGAAAAGTA CCAAACTGGC
TTTGATGAAC CTTTACTCCA CACAATGTTT GTTGATAAGA AACTTAGTGG TGTAAAAGCT
GTTCAGACAC TTTCAAGACT TAACCGAACC GCGAAAGGTA AAAATGACAC GTTTATCCTT
GACTTCGCAA ACGAAACTAT CGATATTCAA GCTGCATTTG CACCATACTA CAAGGAAACA
GCGCTAGATG AAGAAATCAA CGTCAATTTA ATTTACGATA CCAAAGTGTT ACTTCGAAAA
TTTAACGTAT ACGGCGATAG CGATGTTGAG AAATTTATAA AAATACACTA TAAATCCGGC
AAACAAACGG ACACCGATCT TGGTAAACTC ACAAGTCTTT TCAGACCGAT ACAGGATTAT
TATCTCGAAC TAAGTGACGA AGACCAGTTC AAATTCAAGA GATCCGTTAG AAACTTTGTT
AAGTGGTATT CGTACATCAC GCAAATCACG AGGATGTTTG ATCGGGATTT ACAGATGGAA
TACGATTTTC TATACTTCCT AAATAAATCG TTACCAAGTA ACAGTTCAGA ACGAGTTGAT
CTTGATGATA AGATCAAGCT TGAATATTAC AAGCTAGATA AAACGTTTGA GGGTAACATT
GCACTCGAAA CACCGGACAC GGTGATACTT GAAAACCCGA AATCAATCGA TGTTGAGAAA
CCAAAAGAAG GTAAGGATGA ACTGCTTGAA GTGATAATTC AAAGTATTAA CGACCGATTC
AACGGCATAT TCACGGATGG CGACAAAGTC ATTATCGAAA CGATATATGG TCGAATTGTG
AATAACGACG GCGAAAGAAT TGCGAAATAT GCTGAAGATT CGTTTGAGAT ATTTAACGAC
AGTTTCTTCC CAAAGGTGTT TGATGAAGTT GCGAGAAGTT GCTTTTTAGA GCAAACGAAA
GCGTTCAAAA AAATATTCGA AAATAAGGAG TTTTATAACA CGATACAACA GGAGATGGCT
CGACAGGTGT ACCGTAAGTT TAAGAATCGA TAA
|
|---|
| Protein sequence | MDYKEKRFEQ DIESYMLNYG GYAKGDMSTY DAENAIDLPK LVSFIKSTQE KEWAKYERNY
GIDSEQKLLK RFNEEVNTHG LLHVLRNGIS DRGAKLKVCA FKPESNLNAE LVSRYENNIL
TVTRQFAYST ENRNTIDMVL SLNGIPIVAI ELKNQITGQS IENGKKQYIY DRNPKELCFH
FNKRFLVYFT ADLFEVSMAT KLSGKDTTFL PFNQGSGGAG NVGGAGNPEN TNGYTTSYLW
ESVLTKDSLM NIIQRFLNVR VEETKITKNG KEVKKTSTKL IFPRYHQLDV VTKLVDDVKK
NGSGNSYLIQ HSAGSGKSNS IGWIAYRLAS LHDEADKNIF TSVIVVTDRK VLDNQLQDTI
SSFDHKFGLI ETIDDKKTSK DLKDAINSGK KIIVTTLQKF PVIYEEVESN HGKRFAVIID
EAHSSQTGRS AQKLKIALAD NKDALEEYAK IEGDVENSTD DFEDKLVKEL TSHGRHKNLS
FFAFTATPKQ KTLEMFGKRY TDGTFHPFHI YSMKQAIEEG FILDVLKNYM TYKTCYKIAK
STPDNPELPE SEARKAIARY ESLHPYNLQQ KTAVMVEQFR EVTSKKINGQ AKAMIVTPSR
LHAVRYYNEF KRYIKHKGYN DLDVLIAFSG TVTDTDGTEY TESGMNKTKA GNKISEKQLP
EVFHGDEFNM LIVAEKYQTG FDEPLLHTMF VDKKLSGVKA VQTLSRLNRT AKGKNDTFIL
DFANETIDIQ AAFAPYYKET ALDEEINVNL IYDTKVLLRK FNVYGDSDVE KFIKIHYKSG
KQTDTDLGKL TSLFRPIQDY YLELSDEDQF KFKRSVRNFV KWYSYITQIT RMFDRDLQME
YDFLYFLNKS LPSNSSERVD LDDKIKLEYY KLDKTFEGNI ALETPDTVIL ENPKSIDVEK
PKEGKDELLE VIIQSINDRF NGIFTDGDKV IIETIYGRIV NNDGERIAKY AEDSFEIFND
SFFPKVFDEV ARSCFLEQTK AFKKIFENKE FYNTIQQEMA RQVYRKFKNR
|
|---|
| |