| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0238 |
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| Symbol | cobD |
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| ID | 5324961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus vannielii SB |
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| Kingdom | Archaea |
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| Replicon accession | NC_009634 |
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| Strand | - |
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| Start bp | 281063 |
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| End bp | 281995 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640785901 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_001322759 |
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| Protein GI | 150398992 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAATC CAATTTATTT AATTATTGCA GACCTTTTAG ATAGATACAT TGGAGAGCCT
CCTGAAAAAC TCCATCCTGT TGTTTTTATC GGGAATTTCG TTAAGTTTTT AGAAAAAGTG
TTTCCATCAA CGCATTCAGT TGAAAAGCTT AAAGATTTAG TTTTTGGATT TATTACGGTA
TTTTTAACGG TTTTTACCGT ATTTTTAATA TTTTTTACGC TGGAATTAAT TTTAAATTTA
ATTTCAAATT ATTATATTAA ATTATTTTCC TATTCTTTAA TTCTCTCATT TTCTATTGGC
CATAAATCAC TTTTAGAATT TTCAAAAGCC CCAATAAAGT ACATAATGTC TGGGGATATT
AAAAGCGCTA GAAAGTCAGT TCAGCATATC GTAAGTAGGG ATACATCAAC TTTAGATGAA
AAGCACGTAA TTTCAGCAGC AGTTGAAAGC TCTTCAGAAA ATATTACGGA CAGTATAATT
GCACCATTAA TTTATGCTGC AATTTTTGGG CTTTCGGGTG CATTTATATA CCGTGCAGTA
AACACAATGG ATGCAATGCT AGGTTATAAA AACGAAAAAT ATCGATATTA CGGAAAAACT
GCCGCCTATT TAGATGATAT TTTAAATTTT ATCCCTTCAA GAATTGCCGG AATTTTATTA
ATAATTTCTG CACCCTTTTA CGGTGGAAAA ATTGTTCCCG CCATCTATGG ATATCTAAAA
GAAGGTTTTA AAACACCATC TCCAAATTCG GGATACACAA TGGCAGTAAT TGCAAACTCG
CTTTCAATGG AACTTGAAAA AATAGGTTGT TATAAACTTG GAAAAGGAGA AATTACTGTT
TTAAAGGCAG TAAATTCACT AAAAGCAGTT GATTATTCGG TATTACTATT TTTAGTAATT
TACATGGTCT TATACTTTAA TCTAATATAT TAA
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| Protein sequence | MINPIYLIIA DLLDRYIGEP PEKLHPVVFI GNFVKFLEKV FPSTHSVEKL KDLVFGFITV
FLTVFTVFLI FFTLELILNL ISNYYIKLFS YSLILSFSIG HKSLLEFSKA PIKYIMSGDI
KSARKSVQHI VSRDTSTLDE KHVISAAVES SSENITDSII APLIYAAIFG LSGAFIYRAV
NTMDAMLGYK NEKYRYYGKT AAYLDDILNF IPSRIAGILL IISAPFYGGK IVPAIYGYLK
EGFKTPSPNS GYTMAVIANS LSMELEKIGC YKLGKGEITV LKAVNSLKAV DYSVLLFLVI
YMVLYFNLIY
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