Gene Mevan_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMevan_0229 
Symbol 
ID5324987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus vannielii SB 
KingdomArchaea 
Replicon accessionNC_009634 
Strand- 
Start bp271367 
End bp272347 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content28% 
IMG OID640785892 
ProductCRISPR-associated Cas1 family protein 
Protein accessionYP_001322750 
Protein GI150398983 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.583054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATAAAACTAA TTATCAACAC CCCTGGAACA TATATATCAA AATCAGGAAC TCGCTTTAAA 
TTAAAAAATG GCGAAAATGT TCAGGAAATC CCTGCAAAAA AGGTAGAACA AATTTTAATT 
ACTTGCCCTT CTTCCATATC TACTGAGGCA ATATCCTTGG CAGTTGAAGA AAATATTGAT 
TTAGTACTCT TAAAAATGAA TGGAAAACCC GTAGGTAGAT TTTGGCATTC AAAGCACGGG 
AGTATTTCCA CAATTAGAAA AAAACAACTT TTGCTTTCTG AAAATGAACT TGGATTAACA 
CTTGTAAAAG AATGGATTTC TAAAAAAATA GAAAATCAGA CTGATTTTTT AAAAATAATT 
GCTATGAACC GAAGAGATGA AAGAAGAGAT TTGATTAATG AAAGTATCCT AAAAATGGAT 
GAAAGGAAAA ATAAGTTAAA TTCATTAACA TTCGAACAAA ATATTGATGA AATAAGAAAT 
ACGATTCAAG GTTATGAGGG TTATTCAAGT AGACTATATT TTGAAATGAT TTCAAAAAGT 
TTACCTGAAA AATATCAATT TAACAAAAGA AGTAGAAATC CTGCAGAGGA TTACTTTAAC 
TGCATGTTAA ACTACGGCTA TGGAATACTT TATTCCCAAA TTGAACGTTC ATGTATAATT 
TCCGGACTTG ACCCATATAT CGGCATTTTG CATGTTGATA ATTACAATAG AAAAGCGTTT 
ACTTTTGATT TAATTGAAAA ATATCGAATA TATATTGACA AAATCATTTT TAAAATGTTT 
TCAACAAAAA AGATAAAAGA TAACTTTTTT GAAGAAATTG AAGGGGGATT TTATTTAGCA 
AAAGATGGAA AACAAGCGTT AATTTCAGAA TACAACCTAT TAATTGAGAG TAAGGAAAAA 
TATCGCGGAA AAAATATGGA AATTCAAAAT ATAATCCAAT TAGAATGCCA TAATATTGCA 
AACAGGATTT TAAATGGGTG A
 
Protein sequence
MKLIINTPGT YISKSGTRFK LKNGENVQEI PAKKVEQILI TCPSSISTEA ISLAVEENID 
LVLLKMNGKP VGRFWHSKHG SISTIRKKQL LLSENELGLT LVKEWISKKI ENQTDFLKII 
AMNRRDERRD LINESILKMD ERKNKLNSLT FEQNIDEIRN TIQGYEGYSS RLYFEMISKS 
LPEKYQFNKR SRNPAEDYFN CMLNYGYGIL YSQIERSCII SGLDPYIGIL HVDNYNRKAF 
TFDLIEKYRI YIDKIIFKMF STKKIKDNFF EEIEGGFYLA KDGKQALISE YNLLIESKEK 
YRGKNMEIQN IIQLECHNIA NRILNG