| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0228 |
|---|
| Symbol | |
|---|
| ID | 5324991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | - |
|---|
| Start bp | 271072 |
|---|
| End bp | 271362 |
|---|
| Gene Length | 291 bp |
|---|
| Protein Length | 96 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640785891 |
|---|
| Product | CRISPR-associated Cas2 family protein |
|---|
| Protein accession | YP_001322749 |
|---|
| Protein GI | 150398982 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.160554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTTAT GGGTAATTTA CGATATTTCA GATGATAAAA TAAGAAGCAA AGTTTCAAAG
ACATGTTTAA ACTATGGATT ATACCGCGTT CAAAAAAGCG TATTTTTAGG GGACGTAAAT
AGCAATGCTC TTGATGAATT AAAAATTATC TTAGAGGATA CTATTAATTT AGATATTGAT
TCAATCTATG TATTTCCAAT GAGTAAAGAT GAATTAAATA AAGCAGGATT AATTGGCCAA
GCGTTTGATA AAGAGTTGGT ATCTGATGAA ATCGTCTCAA AATTCTTTTA A
|
|---|
| Protein sequence | MLLWVIYDIS DDKIRSKVSK TCLNYGLYRV QKSVFLGDVN SNALDELKII LEDTINLDID
SIYVFPMSKD ELNKAGLIGQ AFDKELVSDE IVSKFF
|
|---|
| |