| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0114 |
|---|
| Symbol | |
|---|
| ID | 5324697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | + |
|---|
| Start bp | 125739 |
|---|
| End bp | 126707 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640785781 |
|---|
| Product | CRISPR-associated Cas1 family protein |
|---|
| Protein accession | YP_001322639 |
|---|
| Protein GI | 150398872 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0232185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGTGTG TAGTAAATAA GTACGGATCT AAAATATCGA AATCTGGAAA CAGGATCGTG
ATTGAAAGTA AAGACGGGGT TTTTGAAAGT TCAATAGAAA ATATAGAACA GGTTTTGATA
TGCGCACCTT CATCGATTAC AACGGAGTTT TTGGAGCTTT CGGTGAAAAA CAACGTTGAT
GTTGTGTTAT TAAATAAATA TGGAAAACCG GTTGGTAGAT TTTTTGGAAA TGGTATTGAA
AAAACTGCTT TAAAACGAAA GCAGCTTAAA TTAACAGAAA ATTGGGCAGG AATTTCTATT
ATAAAGGAAT TTTTATCCGA AAAAATTGAA AACCAAATTG AACACTTGAA CAATATTTCA
AAAGAAAACA TTTCAGAGGG TAGTCTTTCT AAATCCATTT CTAAAATCAA CAAGTCGAAA
AATATGCTTT TGGAAATTAA GGGGGAAAAT ATCGCTGAAA TTAGGGATCA AATACAGGGA
CTCGAAGGTT CAGTAAGCAA AATTTATTTC AGGGTGCTTT CAAAATCGCT TCCGAAAAAA
TACCAATTTA ACGGGCGAAG CAGAAAACCT GCAAAAGACT ACTTCAATTG CATGTTAAAT
TACGGATACG GAATGCTTTA TTCGGAAATT GAAAAGATAT GCATAATTTC TGGAATTGAT
CCCACAATTG GAATTTTACA TACTGATGGG CAGAACCGGA AATCTTTTGT TTTTGACTAC
ATTGAAAAAT ATAGAAATAT TATAGATAAA ATCGTTTATG AATCGTTTTT AAATGAAACT
ATCAAAGAAA ATTTCTTTAA AGAAGTTGAA AGAGGATATT TGCTCGATGA AGAGGGTAGA
AAACATATTA TTTCAAAGTT TAACGGTTAT TTAAACATGA AGGTTAAAAA ATACGGTAAA
ACATATACTA TGGCGGATGT TATGCAGAAA GATGCATATA AACTCTCAGA ACGAATTTTA
AGGAGTTAA
|
|---|
| Protein sequence | MKCVVNKYGS KISKSGNRIV IESKDGVFES SIENIEQVLI CAPSSITTEF LELSVKNNVD
VVLLNKYGKP VGRFFGNGIE KTALKRKQLK LTENWAGISI IKEFLSEKIE NQIEHLNNIS
KENISEGSLS KSISKINKSK NMLLEIKGEN IAEIRDQIQG LEGSVSKIYF RVLSKSLPKK
YQFNGRSRKP AKDYFNCMLN YGYGMLYSEI EKICIISGID PTIGILHTDG QNRKSFVFDY
IEKYRNIIDK IVYESFLNET IKENFFKEVE RGYLLDEEGR KHIISKFNGY LNMKVKKYGK
TYTMADVMQK DAYKLSERIL RS
|
|---|
| |