| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0049 |
|---|
| Symbol | |
|---|
| ID | 5325481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | - |
|---|
| Start bp | 47712 |
|---|
| End bp | 48905 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640785718 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001322576 |
|---|
| Protein GI | 150398809 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA AAGATATTAT TTCGTTTGCT GGAAAAAACA TAACTCGAAA AAAAACCCAA
AGCAGTCTTA CAATAATTGG AATTGTTATA GGGATTTTAG CAATTGTAAG TTTAATCTCT
CTTGGCTACG GCGTTCAAAA CTATATACGT GGAGAAATTA CGACTGTTGG GGCGGATATT
ATTTCAATAC TCCCTTCACA AGAGTTTGGA GGGCCCGTAT CCGGTAAAAA TTTCAAGGAT
AAAGATGTAA ATGCAATTAA AAATGTTAAA GGCATTTCAA ATGTACTCCC CGGGTGGTTT
GGAGGTCAAA TTATAGAATA TCGTGATCAG AAAAGTTATG CAAATACATA CCTTATAACT
CCTTCAATCT ATTCAGACAT ATTTATAAAT TCCTTTGGAT ATTCATTAGA TAGTGGAAGG
TGGTTAAACG ATAATGACAA AAATTCATGT ATTTTAGGAT ATAATGTTGC AAAAAACACG
TTTAACAGGG AAGTTCGTGT TGGAGATCGG GTAACAATAG GCGATAATAG GTATAAAGTT
GTAGGCATTT TAAAAGAAAC AGGAAACCCA AGAAATGACA ACGCAATTAC GCTACCTTAT
GAATCTTCAA ACGATCTTTT CAAAATAAAA GACGAATATA ATATCATAAC CGTTTCCGTT
CGTCCCGGAG AAGATGTAGT AAAAATTTCA GAAGATATTA AAAAAGAAAT TGAAAAGTCA
CGAGGAGATG AAAACTTTTC AGTGTTAACT TCAGAACAGC TTGCAGAATC AATTAACAGT
ATATTCTCAG TTTTAACACT ATTTTTAGTA GGTGTTGCTG GAATTTCATT ATTAGTTGGT
GCAGTTGGAA TATCAAATAC CATGCATATG AGTATTTTAG AACGAAGAAA AGATATTGGA
ATTTTAAAAG CTCTTGGTGC TGAAAATAAT ACAATTCTTT CAATATTTGT TATAGAAGCT
GGATTTTTAG GATTATTTGG TGGAATTATA GGAACGGTTT TTGGAATTTT AATTGCAAAA
GCAATAGAAT ATTTTGCAAA GATTGCAGGA TATGGGCTTA TTAGAGCATG GATTTCTCCA
GAATTAATAT TTGGTGTATT AATATTCTCA TTTGTTGTAG GAATATTAAG TGGATACTTC
CCTGCAAGAA GTGGAGCTAA ATTAAATCCA GTTGATACTT TAAGGGGTGA ATAA
|
|---|
| Protein sequence | MKTKDIISFA GKNITRKKTQ SSLTIIGIVI GILAIVSLIS LGYGVQNYIR GEITTVGADI
ISILPSQEFG GPVSGKNFKD KDVNAIKNVK GISNVLPGWF GGQIIEYRDQ KSYANTYLIT
PSIYSDIFIN SFGYSLDSGR WLNDNDKNSC ILGYNVAKNT FNREVRVGDR VTIGDNRYKV
VGILKETGNP RNDNAITLPY ESSNDLFKIK DEYNIITVSV RPGEDVVKIS EDIKKEIEKS
RGDENFSVLT SEQLAESINS IFSVLTLFLV GVAGISLLVG AVGISNTMHM SILERRKDIG
ILKALGAENN TILSIFVIEA GFLGLFGGII GTVFGILIAK AIEYFAKIAG YGLIRAWISP
ELIFGVLIFS FVVGILSGYF PARSGAKLNP VDTLRGE
|
|---|
| |