| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_2781 |
|---|
| Symbol | |
|---|
| ID | 5317366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | + |
|---|
| Start bp | 2895008 |
|---|
| End bp | 2895766 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640780890 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001317890 |
|---|
| Protein GI | 150395215 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAATAT TATCAGTGCA ACATGTTTCA AAAACATACG GTAAAAAGCA CACATTTCAA
GCACTTAAAG ATATTAACTT TGACATACAA AAAGGCGAAT TCGTTGCGAT TATGGGGCCT
TCTGGATCAG GTAAGACAAC CTTATTAAAT GTACTAAGTT CAATTGACCA AATTTCTAGC
GGTAGCGTGA TTGCTAACGG ACAAGAGCTT AATAAACTTA ATCAAAAAGC ACTTGCCAAA
TTCCGTAAAG AATCATTAGG TTTCATCTTC CAAGATTACA GTATTCTGCC GACATTAACT
GTCAAAGAAA ACATTATGTT ACCTTTATCT GTTCAAAAAA TGTCGAAAGC AACAATGGAA
GAAAATTATA AAGCGATTAC TACAGCATTA GGTATTTATG ACCTAGGAAA TAAATACCCT
AGCGAATTAT CTGGTGGTCA ACAACAAAGA ACTGCAGCAG CGAGAGCATT TGTTCACAAA
CCACAAATCA TATTTGCAGA TGAGCCAACA GGCGCACTCG ACTCGAAAAG TGCAAATGAC
CTATTACAAC GTTTGGAAGA AATGAATAAA TCGTTTGATA CAACTATTGT CATGGTTACA
CATGATCCGG TTGCAGCAAG TTTTGCAGAA CGTGTCATCA TGCTAAAAGA TGGCCAAATT
CATACACAAC TTTATCAGGA AGGACGTTCT AAACAGGCCT TTTATGAAGA CATTGTACAT
CTTCAATCAG TATTAGGTGG TGTCTCAAAT GACATTTAA
|
|---|
| Protein sequence | MTILSVQHVS KTYGKKHTFQ ALKDINFDIQ KGEFVAIMGP SGSGKTTLLN VLSSIDQISS
GSVIANGQEL NKLNQKALAK FRKESLGFIF QDYSILPTLT VKENIMLPLS VQKMSKATME
ENYKAITTAL GIYDLGNKYP SELSGGQQQR TAAARAFVHK PQIIFADEPT GALDSKSAND
LLQRLEEMNK SFDTTIVMVT HDPVAASFAE RVIMLKDGQI HTQLYQEGRS KQAFYEDIVH
LQSVLGGVSN DI
|
|---|
| |