Gene SaurJH1_2688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH1_2688 
Symbol 
ID5315953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH1 
KingdomBacteria 
Replicon accessionNC_009632 
Strand
Start bp2786094 
End bp2787803 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content39% 
IMG OID640780797 
Productcholine dehydrogenase 
Protein accessionYP_001317797 
Protein GI150395122 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID[TIGR01810] choline dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACA AAAATAAATC ATATGATTAT GTCATCATTG GAGGAGGCAG TGCAGGTTCT 
GTACTAGGTA ATCGTCTGAG TGAAGATAAA GATAAAGAAG TCTTAGTATT AGAAGCGGGT
CGCAGTGATT ATTTTTGGGA TTTATTTATC CAAATGCCTG CTGCGTTAAT GTTCCCTTCA
GGCAATAAAT TTTACGATTG GATTTATTCA ACAGATGAAG AACCACATAT GGGCGGTCGT
AAAGTAGCAC ATGCCCGAGG TAAAGTTTTA GGTGGATCAA GTTCGATTAA TGGCATGATT
TATCAACGTG GTAATCCAAT GGACTATGAA GGCTGGGCAG AACCAGAAGG TATGGAAACT
TGGGATTTTG CGCACTGTTT ACCGTATTTT AAAAAATTAG AAAAAACATA CGGTGCAGCG
CCTTATGATA AATTTAGAGG CCATGATGGA CCAATTAAGT TAAAACGAGG GCCAGCAACG
AATCCTTTAT TCCAGTCATT CTTTGATGCA GGTGTTGAAG CAGGTTATCA TAAAACACCT
GATGTGAATG GATTTAGACA AGAAGGTTTT GGACCGTTCG ATAGTCAAGT ACATCGTGGT
CGCCGAATGT CAGCTTCAAG AGCATATTTA CATCCAGCGA TGAAGCGTAA AAACTTAACC
GTTGAAACAC GTGCCTTTGT AACTGAAATT CATTATGAAG GTAGAAGAGC AACTGGTGTT
ACGTATAAGA AAAATGGCAA ACTACATACC ATCGATGCTA ATGAAGTCAT TTTGTCTGGT
GGGGCATTCA ATACGCCACA ATTACTACAA TTATCTGGTA TCGGTGATTC AGAGTTCCTA
AAATCAAAAG GCATTGAGCC ACGTGTTCAT TTACCAGGTG TGGGTGAAAA CTTTGAAGAT
CACTTAGAGG TATACATTCA ACATAAATGT AAGGAACCTG TATCATTACA GCCAAGCTTA
GATATCAAGC GCATGCCATT TATTGGTTTA CAATGGATTT TCACACGTAC AGGTGCAGCA
GCATCTAACC ATTTTGAAGG TGGCGGATTT GTACGTTCAA ATAACGAAGT TGATTATCCT
AACTTAATGT TCCATTTCTT ACCAATAGCT GTAAGATATG ATGGTCAAAA GGCAGCGGTC
GCACATGGTT ATCAAGTTCA CGTAGGACCA ATGTATTCAA ACTCTCGTGG TAGCTTGAAA
ATCAAATCTA AAGATCCATT CGAAAAACCA AGTATCCGCT TTAATTATTT ATCAACAGAA
GAAGATAAAA AAGAATGGGT AGAAGCAATT CGTGTAGCAA GAAATATCTT ATCTCAAAAA
GCAATGGATC CATTCAATGG TGGAGAAATT TCACCAGGAC CAGAAGTGCA AACAGACGAA
GAAATTCTTG ATTGGGTTCG TAGAGATGGT GAAACAGCAT TACACCCATC TTGTAGTGCT
AAAATGGGTC CTGCTTCAGA TCCAATGGCA GTAGTTGACC CGTTAACAAT GAAAGTCCAC
GGTATGGAAA ATTTACGTGT AGTTGATGCA TCCGCTATGC CACGTACGAC AAATGGCAAT
ATACACGCAC CTGTTTTAAT GTTAGCTGAA AAAGCAGCAG ACATTATACG TGGCAGAAAG
CCTTTAGAGC CACAATATAT TGATTATTAT AAGCATGGTG TTCATGATGA AAATGAAGGT
GCAATCGAAG TAAAACCATA CGCTAAATAA
 
Protein sequence
MSNKNKSYDY VIIGGGSAGS VLGNRLSEDK DKEVLVLEAG RSDYFWDLFI QMPAALMFPS 
GNKFYDWIYS TDEEPHMGGR KVAHARGKVL GGSSSINGMI YQRGNPMDYE GWAEPEGMET
WDFAHCLPYF KKLEKTYGAA PYDKFRGHDG PIKLKRGPAT NPLFQSFFDA GVEAGYHKTP
DVNGFRQEGF GPFDSQVHRG RRMSASRAYL HPAMKRKNLT VETRAFVTEI HYEGRRATGV
TYKKNGKLHT IDANEVILSG GAFNTPQLLQ LSGIGDSEFL KSKGIEPRVH LPGVGENFED
HLEVYIQHKC KEPVSLQPSL DIKRMPFIGL QWIFTRTGAA ASNHFEGGGF VRSNNEVDYP
NLMFHFLPIA VRYDGQKAAV AHGYQVHVGP MYSNSRGSLK IKSKDPFEKP SIRFNYLSTE
EDKKEWVEAI RVARNILSQK AMDPFNGGEI SPGPEVQTDE EILDWVRRDG ETALHPSCSA
KMGPASDPMA VVDPLTMKVH GMENLRVVDA SAMPRTTNGN IHAPVLMLAE KAADIIRGRK
PLEPQYIDYY KHGVHDENEG AIEVKPYAK