| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_2680 |
|---|
| Symbol | |
|---|
| ID | 5315763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | - |
|---|
| Start bp | 2777690 |
|---|
| End bp | 2779027 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640780789 |
|---|
| Product | 4-aminobutyrate aminotransferase |
|---|
| Protein accession | YP_001317789 |
|---|
| Protein GI | 150395114 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAG CACATCAATT AATTCAAGAG GATGAACATT ATTTTGCGAA ATCAGGACGT
ATTAAATATT ATCCGTTAGT GATTGATCAT GGATATGGAG CAACATTGGT TGATATTGAG
GGGAAGACAT ATATCGATTT GTTATCGAGT GCAAGTTCTC AAAACGTAGG TCATGCACCT
AGAGAAGTAA CAGAAGCGAT AAAGGCACAA GTTGATAAAT TTATTCATTA TACACCAGCA
TATATGTATC ATGAACCGTT GGTACGTTTA GCTAAGAAGC TTTGTGAGCT TGCACCTGGA
GATTTTGAAA AAAGAGTGAC CTTCGGATTA ACCGGATCAG ACGCAAATGA TGGCATCATT
AAATTTGCCA GAGCATATAC AGGGCGTCCT TATATCATTA GTTTCACTAA TGCATATCAT
GGTTCAACTT TTGGCTCATT GTCTATGTCA GCTATTAGTT TAAATATGCG CAAACATTAT
GGTCCGTTAT TGAATGGTTT TTATCATATT CCGTTTCCAG ATAAATATCG TGGTATGTAC
GAGCAGCCAC AAGCTAATTC AGTAGAAGAA TATTTAGCAC CCTTAAAAGA AATGTTTGCG
AAATATGTAC CTGCTGACGA AGTAGCATGT ATTGTTATTG AAACGATACA AGGCGATGGT
GGACTTTTAG AACCAGTTCC AGGGTATTTT GAAGCGTTAG AAAAGATTTG TCGTGAACAT
GGTATTTTAA TCGCTGTCGA TGATATTCAA CAAGGTTTTG GGCGAACAGG TACATGGAGT
TCAGTCTCGC ATTTTAATTT TACGCCTGAT TTAATCACTT TCGGAAAATC CTTAGCAGGT
GGTATGCCCA TGTCAGCAAT TGTTGGACGC AAAGAGATTA TGAATTGTTT AGAAGCACCA
GCACATTTAT TTACAACAGG TGCTAATCCA GTTAGTTGTG AAGCTGCATT AGCCACAATT
CAAATGATTG AAGATCAGTC GCTTCTTCAG GCTAGTGCGG AAAAAGGGGA ATATGTTAGG
AAACGAATGG ATCAATGGGT ATCTAAATAC AATAGTGTAG GCGATGTTAG AGGTAAAGGT
CTGAGCATTG GTATTGATAT TGTTTCCGAC AAAAAACTCA AAACACGTGA TGCCAGTGCG
GCACTTAAAA TTTGTAATTA CTGCTTTGAG CATGGCGTAG TTATTATAGC TGTAGCAGGA
AATGTGTTGC GATTCCAACC GCCATTGGTG ATAACATATG AGCAATTAGA CACGGCGTTA
AACACTATAG AAGATGCACT GACTGCTTTG GAAGCAGGTA ACTTAGATCA ATATGACATA
TCTGGACAAG GTTGGTAA
|
|---|
| Protein sequence | MSKAHQLIQE DEHYFAKSGR IKYYPLVIDH GYGATLVDIE GKTYIDLLSS ASSQNVGHAP
REVTEAIKAQ VDKFIHYTPA YMYHEPLVRL AKKLCELAPG DFEKRVTFGL TGSDANDGII
KFARAYTGRP YIISFTNAYH GSTFGSLSMS AISLNMRKHY GPLLNGFYHI PFPDKYRGMY
EQPQANSVEE YLAPLKEMFA KYVPADEVAC IVIETIQGDG GLLEPVPGYF EALEKICREH
GILIAVDDIQ QGFGRTGTWS SVSHFNFTPD LITFGKSLAG GMPMSAIVGR KEIMNCLEAP
AHLFTTGANP VSCEAALATI QMIEDQSLLQ ASAEKGEYVR KRMDQWVSKY NSVGDVRGKG
LSIGIDIVSD KKLKTRDASA ALKICNYCFE HGVVIIAVAG NVLRFQPPLV ITYEQLDTAL
NTIEDALTAL EAGNLDQYDI SGQGW
|
|---|
| |