Gene SaurJH1_2521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH1_2521 
Symbol 
ID5316895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH1 
KingdomBacteria 
Replicon accessionNC_009632 
Strand- 
Start bp2611504 
End bp2612445 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content35% 
IMG OID640780632 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_001317632 
Protein GI150394957 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA TTAAATATAT ACTTGTCGTG TTTGTCTTAT CGCTTACCGT ATTATCTGGA 
TGTAGTTTGC CCGGACTAGG TAGTAAGAGC ACGAAAAATG ATGTCAAAAT TACAGCATTA 
TCAACAAGCG AATCGCAAAT TATTTCACAT ATGTTACGGT TGTTAATAGA GCATGATACA 
CATGGTAAGA TAAAGCCAAC ATTAGTAAAT AATTTAGGGT CAAGTACGAT TCAACATAAT 
GCCTTAATTA ATGGGGATGC TAATATATCA GGTGTTAGAT ATAATGGCAC AGATTTAACG 
GGAGCTTTGA AGGAAGCACC AATTAAAGAT CCTAAGAAAG CAATGATAGC CACACAACAA 
GGATTTAAAA AGAAATTTGA TCAAACGTTT TTTGATTCGT ATGGTTTTGC GAATACGTAT 
GCATTCATGG TAACGAAGGA AACTGCTAAA AAATATCATT TAGAGACAGT TTCAGATTTA 
GCAAAGCATA GTAAAGATTT ACGTTTAGGT ATGGATAGTT CATGGATGAA TCGTAAAGGC 
GATGGCTATG AAGGATTTAA AAAAGAGTAT GGTTTTGACT TTGGTACAGT GAGACCAATG 
CAAATAGGTC TAGTCTACGA CGCATTAAAC ACAGAGAAGT TAGACGTTGC ATTAGGTTAT 
TCTACAGATG GTCGAATTGC CGCGTATGAT TTGAAAGTAC TTAAAGATGA TAAACAATTT 
TTCCCACCTT ATGCTGCGAG TGCTGTTGCA ACAAATGAAT TATTACGGCA ACACCCAGAA 
CTTAAAACGA CGATTAATAA GTTGACAGGA AAGATTTCGA CTTCAGAGAT GCAACGCTTG 
AATTATGAAG CGGATGGTAA AGGTAAAGAA CCTGCTGTCG TCGCAGAAGA ATTTTTGAAA 
AAACACCACT ATTTTGATAA ACAGAAAGGT GGTCATAAGT AA
 
Protein sequence
MKKIKYILVV FVLSLTVLSG CSLPGLGSKS TKNDVKITAL STSESQIISH MLRLLIEHDT 
HGKIKPTLVN NLGSSTIQHN ALINGDANIS GVRYNGTDLT GALKEAPIKD PKKAMIATQQ 
GFKKKFDQTF FDSYGFANTY AFMVTKETAK KYHLETVSDL AKHSKDLRLG MDSSWMNRKG 
DGYEGFKKEY GFDFGTVRPM QIGLVYDALN TEKLDVALGY STDGRIAAYD LKVLKDDKQF 
FPPYAASAVA TNELLRQHPE LKTTINKLTG KISTSEMQRL NYEADGKGKE PAVVAEEFLK 
KHHYFDKQKG GHK