| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_2497 |
|---|
| Symbol | |
|---|
| ID | 5315712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | - |
|---|
| Start bp | 2583193 |
|---|
| End bp | 2583885 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640780608 |
|---|
| Product | 6-carboxyhexanoate--CoA ligase |
|---|
| Protein accession | YP_001317608 |
|---|
| Protein GI | 150394933 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1424] Pimeloyl-CoA synthetase |
|---|
| TIGRFAM ID | [TIGR01204] 6-carboxyhexanoate--CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAGTA TAAAAATGCG TTCTAGCAAT CAAGATGTTC ATATTAGTGG TGCTGAAACG
ATTTGTGAGT TTGACAAAAT AGAACAGACG GTACAAAGGT TTTATAATAA AGGTTTTTTT
CATGAAAATG GGCAACCGGA TTTTCTCAAT ATAAAAATAC AAAAAATTAT GGAACCGATT
CAACAAATAA AAGCATTACA AATTATTGAG GATGATAAAG CAAATCTCCA ACATTTAACA
CAAGAATGTG GTGTCACTGA ACAAGCGCTA AATCAAGGGA TGACATATAT TAAAAATGAA
ACGGTTTATA CAGGAGCTAT TATTCTATCT GCTATATCTG GTAAACGTTT AGATTCATTT
GGACAAAGGG GGATTAGGGC AACACATTTT TCGTTTGAAG ATATAAATAA TAAAGGTGAT
CTTAATGAAA GAGTGACTGA TGCCTTAGCA ATTGCTAGTT GTATCAATGC GCATCCGTAT
GTCAAAGGAG AACTTTGCGT GTCCGATGAC TTAACGTATA CGACAGGTTA TTTTGCCGCT
GCTAAAATTG GTTACCATCG ATTATTTGAT ATTAAACCAG TTAATACGAG ATATGGAGGC
AGAATAATAT TTGTGGACGA TTGTATTGAT TTAAATCATT ACATATCATT TTTAGAAAGC
ACACCGAAGC AAGTTGTTTA TGAAACGGTA TAG
|
|---|
| Protein sequence | MYSIKMRSSN QDVHISGAET ICEFDKIEQT VQRFYNKGFF HENGQPDFLN IKIQKIMEPI
QQIKALQIIE DDKANLQHLT QECGVTEQAL NQGMTYIKNE TVYTGAIILS AISGKRLDSF
GQRGIRATHF SFEDINNKGD LNERVTDALA IASCINAHPY VKGELCVSDD LTYTTGYFAA
AKIGYHRLFD IKPVNTRYGG RIIFVDDCID LNHYISFLES TPKQVVYETV
|
|---|
| |