Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_2426 |
Symbol | |
ID | 5317106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | - |
Start bp | 2512719 |
End bp | 2514101 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640780538 |
Product | TcaA protein |
Protein accession | YP_001317538 |
Protein GI | 150394863 |
COG category | [S] Function unknown |
COG ID | [COG4640] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.576701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATCTT GCCCGAAGTG CGGACAACAA GCACAAGATG ATGTACAGAT ATGTACACAA TGTGGACATA AATTTGATAG TCGTCAAGCA TTATATAGAA AGTCAACCGA TGAAGATATA CAAACTAATA ACATCAAGAT GAGAAAAATG GTGCCTTGGG CAATTGTTTT TTTCATTTTA ATCTTAATTA TTATATTGTT CTTTTTACTA AGAAACTTCA ATTCACCTGA AGCGCAAACT AAAATATTAG TGAATGCGAT TGAGAATAAT GATAAACAAA AAGTAGCAAC ATTATTAAGT ACTAAAGATA ATAAAGTAGA TTCTGAAGAA GCGAAAGTAT ACATTAACTA TATCAAAGAT GAAGTTGGGC TTAAGCAATT TGTCAGCGAC CTTAAAAATA CGGTACATAA ATTGAATAAG AGTAAGACCA GCGTAGCTTC TTATATTCAA ACCAGATCTG GTCAAAATAT ATTACGTGTA AGTAAAAATG GCACGCGTTA TATCTTTTTC GATAATATGA GCTTTACTGC ACCTACCAAG CAACCAATTG TTAAGCCGAA AGAAAAAACA AAATATGAGT TTAAATCTGG TGGTAAGAAA AAGATGGTTA TAGCTGAAGC AAATAAAGTG ACGCCAATAG GTAATTTTAT ACCGGGGACA TATAGAATTC CAGCTATGAA ATCAACTGAG AACGGTGATT TTGCAGGCTA TTTAAAATTT GATTTTAGAC AAAGTAATTC TGAAACGGTA GATGTTACTG AAGATTTTGA AGAAGCAAAT ATAACTGTAA CTTTAAAAGG CGATACAAAA TTAAATGATA GTTCTAAAAA AGTAACTATA AATGACCGTG AAATGGCATT TTCAAGTTCC AAAACGTATG GTCCATATCC ACAAAATAAA GATATTACCA TTTCAGCTTC AGGTAAAGCG AAAGGTAAAA CATTTACAAC ACAGACGAAG ACGATTAAAG CCAGCGATTT AAAATACAAT ACAGAGATAA CTTTGAATTT TGACAGTGAA GATATCGAAG ACTATGTTGA AAAGAAAGAA AAAGAAGAAA ACAGCTTGAA GAACAAATTG ATAGAATTCT TTGCTGGATA TTCTTTAGCG AATAATGCTG CGTTTAATCA GTCAGATTTT GATTTTGTAT CGTCATATAT AAAAAAAGGA TCATCTTTTT ATGATGATGT AAAGAAGCGT GTATCTAAAG GAAGTTTAAT GATGATTAGT TCACCACAAA TTATAGATGC TGAAAAACAT GGTGATAAGA TTACCGCAAC CGTAAGATTA ATAAATGAAA ACGGTAAGCA AGTAGATAAA GAATATGAGC TTGAACAAGG CTCGCAAGAC CGCTTGCAAT TAATCAAGAC ATCAGAAAAA TAG
|
Protein sequence | MKSCPKCGQQ AQDDVQICTQ CGHKFDSRQA LYRKSTDEDI QTNNIKMRKM VPWAIVFFIL ILIIILFFLL RNFNSPEAQT KILVNAIENN DKQKVATLLS TKDNKVDSEE AKVYINYIKD EVGLKQFVSD LKNTVHKLNK SKTSVASYIQ TRSGQNILRV SKNGTRYIFF DNMSFTAPTK QPIVKPKEKT KYEFKSGGKK KMVIAEANKV TPIGNFIPGT YRIPAMKSTE NGDFAGYLKF DFRQSNSETV DVTEDFEEAN ITVTLKGDTK LNDSSKKVTI NDREMAFSSS KTYGPYPQNK DITISASGKA KGKTFTTQTK TIKASDLKYN TEITLNFDSE DIEDYVEKKE KEENSLKNKL IEFFAGYSLA NNAAFNQSDF DFVSSYIKKG SSFYDDVKKR VSKGSLMMIS SPQIIDAEKH GDKITATVRL INENGKQVDK EYELEQGSQD RLQLIKTSEK
|
| |