| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_2388 |
|---|
| Symbol | |
|---|
| ID | 5316386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | - |
|---|
| Start bp | 2474621 |
|---|
| End bp | 2475538 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640780500 |
|---|
| Product | bile acid:sodium symporter |
|---|
| Protein accession | YP_001317500 |
|---|
| Protein GI | 150394825 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0385] Predicted Na+-dependent transporter |
|---|
| TIGRFAM ID | [TIGR00841] bile acid transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0056492 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCAAA AATTGAGTAT ATTTGCCACG AAGAGTTTTT TGGTATGGAT GTTAGTAGCA
GCTGTTATTG GATTTATTTT CCCACAACAT GTTGCGACAT TAGGTAAGTG GGTACCTTAT
TTACTTGGTA TTGTTATGTT AGGTATGGGA TTAACAATTA CACCTAATGA TTTCAAAATG
GTCTTTAAAG CACCTAGAGC AGTAATTATT GGTGTCTGTC TACAATTCAG TATTATGCCC
ACATTAGCAT TTATAATTGC AAAGTCTTTT CATTTACCAC CTGATATTGC TGTTGGCGTA
ATATTAGTTG GATGTTGTCC GGGTGGGACA TCAAGTAATG TAATGAGTTA TTTAGCCAAA
GCTAACGTAG CACTTTCTGT TTCTATTACG ACGGTCTCTA CGTTGCTAGC GCCATTCGTT
ACACCTGCGT TAATATATCT ATTTGCAAAT GAATGGTTGG AAGTATCTTT CCTGAGTATG
TTGTGGTCAG TTGTTCAAGT TGTATTAATT CCAATTGCTT TAGGTATTGT TTTGCAAATT
ATTAATCGTA AAATTGCTGA AAAAGCTTCT ACAGCTTTGC CGATTATATC AGTTGTTGCT
ATTTCATTAA TTTTAGCAAT AGTTGTAGGT GGCAGTAAGC ACCAAATCTT AACTACAGGA
TTATTAATAT TTTTAGTAGT TATTTTACAT AACGTATTAG GGTATACGAT TGGATATTGG
TTAGCTCGTC TTTTAAAATT AGATCGACAA GATCAAAAAG CAGTCAGTAT TGAAGTTGGA
ATGCAGAACT CTGGTTTAGC TGTGTCATTA GCAGCATTGC ATTTTAATCC AATTGCAGCA
GTACCAGGCG CAGTGTTTAG TTTCATTCAT AATATAACAG GGCCTATTTT AGCAAAGTAT
TGGTCAAAAA AGTTATAA
|
|---|
| Protein sequence | MFQKLSIFAT KSFLVWMLVA AVIGFIFPQH VATLGKWVPY LLGIVMLGMG LTITPNDFKM
VFKAPRAVII GVCLQFSIMP TLAFIIAKSF HLPPDIAVGV ILVGCCPGGT SSNVMSYLAK
ANVALSVSIT TVSTLLAPFV TPALIYLFAN EWLEVSFLSM LWSVVQVVLI PIALGIVLQI
INRKIAEKAS TALPIISVVA ISLILAIVVG GSKHQILTTG LLIFLVVILH NVLGYTIGYW
LARLLKLDRQ DQKAVSIEVG MQNSGLAVSL AALHFNPIAA VPGAVFSFIH NITGPILAKY
WSKKL
|
|---|
| |