Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_2382 |
Symbol | |
ID | 5315288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 2470157 |
End bp | 2471029 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640780494 |
Product | helix-turn-helix protein RpiR |
Protein accession | YP_001317494 |
Protein GI | 150394819 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAACG TACTAACAGA AATAGATAGT CAATATCCAT ATATGACTAA AAATGAAAAA AAGATAGCTA AATTTATACT AAATTCACCT CAAAAGGTGA TTAAAATGAG GTCTCAAGAC TTAGCAAGCT TATTAGATAT TAGTACATCA TCAGTCATTC GATTCAGCAA GAAAATTACT GATGGCGGTT TTCACGACTT GAAAATAAAT ATATCTAAAT ATGTTCCTAA AGCATCATCA ATTTACAATG TTGAATTAAT GAATAACGAA AGCACAGAAT CTTTAAGAAC TAAACTCCAT ACACGTACTA CACGCGCACT TAATCATGCA AATAACGAAT TAAATGATAA AACTATTGAT CAAATATGTC ATTGTTTAAA ACGTTCTGAG ACGATTTTTA TATATGGTTT TGGCGCATCT TTTGTAGTTG CTACCGACTT ATACCAAAAG TTATCAAGAA TAGGTCTTAA TATTCAACTT GTTCAAGAAA CACATATTTT TGCTACATTA TTAGCAACTC ACAATTCGAA CGACAGTGTT ATTCTTATTA CTAACAATGG TACGCAAAGT GAAATGCAAT CAATGGTTAA AGTTATTGAT GACTACCATA TACCTATAAT TACAATTACT AGTACAAGGG ATAATCCCGT AGCACAGGCA TCAAATATTG TTTTAACTTA TGGGAAAACT GATGAAAATG AGATGCATAT GGGAGCAACA ACTTCATTAT TTGCTCAAAT GTTCACTATT GATATTTTAT ATTATCGTTA TGTTGCATTA AATTATCACG CATCATTAGA TTTCATAACA CAATCTAAAA TGGCTTTAGA TAACTATCGT AAACATTTAT CAAATATTAA CTTTAAACAT TAA
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Protein sequence | MSNVLTEIDS QYPYMTKNEK KIAKFILNSP QKVIKMRSQD LASLLDISTS SVIRFSKKIT DGGFHDLKIN ISKYVPKASS IYNVELMNNE STESLRTKLH TRTTRALNHA NNELNDKTID QICHCLKRSE TIFIYGFGAS FVVATDLYQK LSRIGLNIQL VQETHIFATL LATHNSNDSV ILITNNGTQS EMQSMVKVID DYHIPIITIT STRDNPVAQA SNIVLTYGKT DENEMHMGAT TSLFAQMFTI DILYYRYVAL NYHASLDFIT QSKMALDNYR KHLSNINFKH
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