| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_2239 |
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| Symbol | |
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| ID | 5316782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus aureus subsp. aureus JH1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009632 |
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| Strand | - |
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| Start bp | 2341010 |
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| End bp | 2341693 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640780354 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_001317354 |
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| Protein GI | 150394679 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000410283 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCAAAT CAACTAAAAA AAGTAATGAC ACAATCGTAG AAACATTTAA GGATATCATC
CCTTTATCAT TTGGAGAAGA AATTGGTAAT GCGGCATCTC ATGGTGTTGC AGCTTTGTTA
ACATTATTAG TGTTACCCTA TGCGGCTGTG CACAGTTATA TTGCACATGG TACGCTTGCG
TCTGTGAGTA TGTCTATTTA TGTTATTTCT ATCTTTATGA TGTTTATTTC ATCTACTATT
TATCATTCTA TGCAAAATGA AACACCTCAT AAATATATTT TAAGGATTAT CGATCACAGT
ATGATTTACG TAGCAATTTC TGGTACATAT ACGCCTATTT TGTTAACAGT TGTAGGTGGT
TGGATAGGTT GGACAGTATT TATTTTATTA TGGGGAACGA CACTTTGGGG GATTTTATAT
AAATCCATAG CTGTCAAAGT TAACCAAAAG TTAAGCTTAA TTGTCTATTT AGTGATGGGC
TGGGTAGGTA TTATCTTGTT ACCAATTATT TTTATTCGCA CATCATGGAT ATTCATATTA
TTCATTTTCT TAGGTGGTGT GTCTTATACA ATTGGTGCAT GGTTTTATGC ACAAAAGAAT
AGACCATATT TTCATATGAT TTGGCATATT TTTATTGTAA TAGCATCACT ATTGCATTTA
ATTGCGATCT TATATTTTAT GTAG
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| Protein sequence | MSKSTKKSND TIVETFKDII PLSFGEEIGN AASHGVAALL TLLVLPYAAV HSYIAHGTLA
SVSMSIYVIS IFMMFISSTI YHSMQNETPH KYILRIIDHS MIYVAISGTY TPILLTVVGG
WIGWTVFILL WGTTLWGILY KSIAVKVNQK LSLIVYLVMG WVGIILLPII FIRTSWIFIL
FIFLGGVSYT IGAWFYAQKN RPYFHMIWHI FIVIASLLHL IAILYFM
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