| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_2236 |
|---|
| Symbol | |
|---|
| ID | 5316779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | - |
|---|
| Start bp | 2337153 |
|---|
| End bp | 2338598 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640780351 |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_001317351 |
|---|
| Protein GI | 150394676 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.126562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCTA AAGTTGAATT AACAACCCGG AGACGAAACT TCATAGTTGC TGTTATGTTG
ATTAGTGCGT TTGTAGCTAT TTTAAATCAA ACATTATTAA ATACAGCGTT ACCTAGTATA
ATGAGAGAAT TAAATATTAA TGAAAGTACA TCGCAATGGC TAGTTACTGG GTTTATGCTT
GTTAATGGCG TCATGATACC TCTGACGGCA TATCTAATGG ATAGAATTAA AACTAGACCT
TTATACTTAG CGGCGATGGG GACATTTTTA TTAGGTTCTA TTGTTGCAGC CTTAGCTCCG
AATTTTGGAG TTTTAATGTT AGCACGTGTA ATTCAAGCGA TGGGTGCAGG CGTACTTATG
CCCTTAATGC AATTTACGTT ATTTACATTG TTCAGTAAAG AACATCGAGG TTTTGCAATG
GGACTAGCAG GTTTAGTAAT TCAATTTGCA CCAGCAATAG GCCCTACAGT TACAGGATTA
ATTATTGATC AAGCGAGTTG GCGAGTACCA TTTATTATAA TTGTAGGAAT TGCTTTAGTT
GCCTTTGTTT TCGGCTTAGT TTCAATCTCA AGTTACAATG AAGTGAAATA TACGAAATTA
GATAAGCGCT CAGTAATGTA TTCAACTATT GGATTCGGGT TAATGCTATA CGCATTTAGT
AGTGCAGGAG ATTTAGGATT TACAAGTCCA ATAGTAATAG GTGCGTTGAT AATAAGTATG
GTTATTATCT ATTTATTTAT ACGTAGACAA TTTAATATTA CTAATGTACT TTTAAATTTA
AGGGTTTTTA AAAATAGAAC ATTTGCATTA TGTACGATTA GTTCAATGAT TATAATGATG
TCAATGGTTG GACCTGCGCT GCTTATACCG CTATATGTTC AAAATAGTTT ATCTTTATCT
GCCTTGTTAT CAGGACTTGT TATCATGCCT GGTGCAATAA TAAATGGTAT TATGTCAGTT
TTTACAGGTA AATTTTATGA TAAGTATGGT CCTAGACCAT TGATTTATAC TGGTTTTACA
ATTTTAACAA TTACTACAAT TATGTTGTGT TTCTTGCATA CAGACACATC TTATACGTAT
TTAATAGTCG TATATGCAAT TAGAATGTTT TCAGTTTCTT TACTCATGAT GCCGATAAAT
ACTACAGGAA TTAATTCTTT GAGAAATGAA GAAATCTCAC ATGGCACGGC TATTATGAAC
TTTGGTCGTG TAATGGCTGG TTCACTAGGC ACAGCTTTAA TGGTTACATT AATGAGTTTT
GGTGCAAAAA TATTTTTATC TACATCGCCA TCGCATTTAA CTGCAACTGA AATTAAACAG
CAATCCATTG CTATAGGGGT GGATATCTCA TTTGCTTTTG TAGCTGTGCT TGTTATGGCA
GCTTATGTGA TAGCACTTTT TATAAGAGAA CCTAAAGAAA TAGAAAGTAA TAGAAGGAAA
TTTTAA
|
|---|
| Protein sequence | MMAKVELTTR RRNFIVAVML ISAFVAILNQ TLLNTALPSI MRELNINEST SQWLVTGFML
VNGVMIPLTA YLMDRIKTRP LYLAAMGTFL LGSIVAALAP NFGVLMLARV IQAMGAGVLM
PLMQFTLFTL FSKEHRGFAM GLAGLVIQFA PAIGPTVTGL IIDQASWRVP FIIIVGIALV
AFVFGLVSIS SYNEVKYTKL DKRSVMYSTI GFGLMLYAFS SAGDLGFTSP IVIGALIISM
VIIYLFIRRQ FNITNVLLNL RVFKNRTFAL CTISSMIIMM SMVGPALLIP LYVQNSLSLS
ALLSGLVIMP GAIINGIMSV FTGKFYDKYG PRPLIYTGFT ILTITTIMLC FLHTDTSYTY
LIVVYAIRMF SVSLLMMPIN TTGINSLRNE EISHGTAIMN FGRVMAGSLG TALMVTLMSF
GAKIFLSTSP SHLTATEIKQ QSIAIGVDIS FAFVAVLVMA AYVIALFIRE PKEIESNRRK
F
|
|---|
| |