| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_2212 |
|---|
| Symbol | deoD |
|---|
| ID | 5317075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | + |
|---|
| Start bp | 2296224 |
|---|
| End bp | 2296934 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640780319 |
|---|
| Product | purine nucleoside phosphorylase |
|---|
| Protein accession | YP_001317328 |
|---|
| Protein GI | 150394653 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0813] Purine-nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAG GTACACCACA TATTCAACCA AATGGAGTAA AAATTGCTAA AACAGTATTA
ATGCCTGGCG ATCCGCTACG CGCAAAATAT ATTGCTGATA ATTTTTTAGA AAATGTTGAA
CAATTTAACG ATGTACGTAA CATGTTTGGT TACACTGGTA CATATAAAGG TAAAGAAGTT
TCTGTAATGG GTTCTGGTAT GGGTATTCCA AGTATTGGTA TTTACTCATA TGAGTTATAC
AACTTCTTTG ATGTAGATAC AATCATTCGT ATCGGTTCTT GTGGCGCATT ACAAGAAAAT
GTTAACTTAT ACGATGTTAT TATTGCACAA GCTGCATCAA CTAATTCAAA TTATGTAGAT
CAATACAATA TTCCAGGTCA TTTCGCGCCT ATCGCTGACT TCGAGTTAGT AACTAAAGCT
AAAAATGTCG CTGACCAAAT CGGTGCTACT ACACACGTAG GTAACGTATT ATCTTCTGAT
ACATTTTACA ATGCCGATCC AACATTCAAT GATGCTTGGA AAAAAATGGG TATTTTAGGT
ATCGAAATGG AATCAGCTGG TTTATATTTA AATGCGATTC ATGCTGGTAA AAAAGCACTT
GGTATTTTCA CAGTAAGTGA TCATATTTTA CGTGACGAAG CTACTACACC TGAAGAACGT
CAAAATTCAT TTACACAAAT GATGGAAATC GCTTTAGAAA TCGCAGAGTA A
|
|---|
| Protein sequence | MTKGTPHIQP NGVKIAKTVL MPGDPLRAKY IADNFLENVE QFNDVRNMFG YTGTYKGKEV
SVMGSGMGIP SIGIYSYELY NFFDVDTIIR IGSCGALQEN VNLYDVIIAQ AASTNSNYVD
QYNIPGHFAP IADFELVTKA KNVADQIGAT THVGNVLSSD TFYNADPTFN DAWKKMGILG
IEMESAGLYL NAIHAGKKAL GIFTVSDHIL RDEATTPEER QNSFTQMMEI ALEIAE
|
|---|
| |