Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_2011 |
Symbol | |
ID | 5316987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | - |
Start bp | 2113712 |
End bp | 2114740 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640780118 |
Product | hypothetical protein |
Protein accession | YP_001317132 |
Protein GI | 150394457 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2706] 3-carboxymuconate cyclase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAAATG GATATATTGG TTCTTACACT AAAAAGAATG GTAAAGGGAT TTATCGTTTT GAATTAAACG AAAATCAGTC ACGTATTGAT TTATTAGAAA TAGGATTTGA ATTAGAAGCG TCTACATATT TGGTGCGTAA TAACGAAGTT TTATATGGAA TCAACAAAGA AGGAGAACAA TGCGGTGTTG CGAGTTTGAA AATTGATGAC AATGGTGAAT TGCATTTATT AAATAAATGT TTGTCTTCAA AAGCTGGTAC AGGTTGTTAT GTATCGATTT CAGAAGATAA ACGATATTTA TTTGAAGCGG TATATGGTGC TGGCATCATA CGTATGTATG AATTAAATAC GCACACAGGT GAAATTATAC GTCTAATTCA AGAACTTGCA CATGATTTTC CAACAGGTAC ACATGAAAGA CAAGATCATC CACACGCACA TTATATTAAT CAAACTCCAG ATGGTAAGTA CGTTGCAGTA ACAGATTTAG GTGCTGATCG TATCGTTACT TATAAATTTG ATGACAACGG GTTTGAATTT TATAAAGAAT CTTTATTTAA AGATAGTGAT GGGACAAGAC ATATTGAATT TCATGATAAT GGAAAATTTG CTTATGTCGT ACACGAATTA TCAAATACTG TGAGTGTTGC AGAATATAAT GACGGTAAAT TTGAAGAGCT CGAGCGTCAT TTAACAATTC CTGAAAACTT TGATGGAGAT ACTAAACTTG CAGCAGTGCG TTTGTCTCAT GATCAACAAT TCTTATATGT ATCTAATAGA GGGCATGATA GCATTGCAAT TTTTAAAGTT CTTGATAATG GTCAACACTT AGAACTAGTA ACAATTACTG AAAGTGGTGG TCAATTCCCA AGAGATTTTA ATATTGCCTC ATCAGATGAC CTTTTAGTTT GTGCTCATGA GCAAGGAGAT TCAGTTGTAA CTGTTTTTGA AAGAAGTAAA GAAACAGGTA AAATTACTCT ATGTGATAAT ACTCGTGTAG CATCTGAAGG TGTATGTGTC ATATTTTAA
|
Protein sequence | MTNGYIGSYT KKNGKGIYRF ELNENQSRID LLEIGFELEA STYLVRNNEV LYGINKEGEQ CGVASLKIDD NGELHLLNKC LSSKAGTGCY VSISEDKRYL FEAVYGAGII RMYELNTHTG EIIRLIQELA HDFPTGTHER QDHPHAHYIN QTPDGKYVAV TDLGADRIVT YKFDDNGFEF YKESLFKDSD GTRHIEFHDN GKFAYVVHEL SNTVSVAEYN DGKFEELERH LTIPENFDGD TKLAAVRLSH DQQFLYVSNR GHDSIAIFKV LDNGQHLELV TITESGGQFP RDFNIASSDD LLVCAHEQGD SVVTVFERSK ETGKITLCDN TRVASEGVCV IF
|
| |