Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_2008 |
Symbol | |
ID | 5316984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 2110253 |
End bp | 2110813 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640780115 |
Product | isochorismatase hydrolase |
Protein accession | YP_001317129 |
Protein GI | 150394454 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACATC GCGCACTATT AGTTGTTGAC TATTCATATG ACTTTATCGC AGATGACGGC TTACTAACAT GCGGTAAACC TGGACAAAAT ATTGAAGATT TTATTGTTTC TCGTATCAAT GACTTTAATT ATTATCAAGA CCATATATTC TTTTTAATGG ATTTACATTA TTTACATGAC ATTCATCATC CTGAAAGTAA ATTATTCCCA CCACACAATA TCGTAGATAC AAGTGGTAGA GAATTATACG GTAAAGTAGG TAAATTATAC GAAACAATTA AAGCGCAACC TAATGTACAT TTCATTGATA AAACGCGCTA TGATTCGTTC TTTGGTACCC CGCTTGATAG TTTATTGAGA GAAAGAAGTA TTAATCAAGT CGAAATCGTT GGTGTATGTA CCGATATTTG CGTGTTACAT ACAGCAATTT CTGCATACAA CTTAGGTTAT AAAATTTCAG TACCTGCTGA GGGAGTGGCT TCATTTAATC AAAAAGGGCA TGAATGGGCA CTTGCACATT TCAAAAACTC ATTAGGTGCA GAGGTAGAAC AACACGTTTA A
|
Protein sequence | MTHRALLVVD YSYDFIADDG LLTCGKPGQN IEDFIVSRIN DFNYYQDHIF FLMDLHYLHD IHHPESKLFP PHNIVDTSGR ELYGKVGKLY ETIKAQPNVH FIDKTRYDSF FGTPLDSLLR ERSINQVEIV GVCTDICVLH TAISAYNLGY KISVPAEGVA SFNQKGHEWA LAHFKNSLGA EVEQHV
|
| |