| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_1858 |
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| Symbol | |
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| ID | 5316282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus aureus subsp. aureus JH1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009632 |
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| Strand | - |
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| Start bp | 1950271 |
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| End bp | 1951314 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640779936 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001316989 |
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| Protein GI | 150394314 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD
[TIGR01563] phage head-tail adaptor, putative, SPP1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTCAAT TTATGGATTA TGCGATTCAA CTTGCAAATA TGGTACAAGG TCAAACAGGT
GTTAATCCAC CCGTTGGCGC TGTTGTAGTT AATGAAGGTA GGATTGTTGG TATTGGTGCA
CACTTGAGAA AAGGTGACAA GCATGCGGAG GTTCAAGCAC TTGATATGGC ACAACAAAAT
GCTGAAGGTG CGACGATTTA TATTACGTTA GAGCCATGTA GTCATTTTGG TTCAACACCA
CCCTGTGTTA ACAAAATTAT TGATTGTAAG ATAGCAAAAG TAGTATACGC AACAAAAGAC
AATTCGTTAG ACACACATGG TGATGAGACG TTACGGGCTC ACGGTATTGA GGTTGAATGC
GTTGATGATG AACGGGCATC ACAATTATAC CAAGACTTTT TTAAAGCAAA AGCAAAGCAA
CTGCCACAAA TTACAGTGAA AGTATCTGCA AGTTTAGATG GTAAACAAGC GAATGATAAT
GGACAAAGTC AATGGATTAC TAACAAAGAG GTTAAACAAG ATGTCTATAA GTTAAGACAT
CGACACGACG CAGTGTTAAC TGGAAGACGT ACAGTTGAAT TAGATGATCC ACAATATACT
ACACGTATTC AAGATGGAAA AAACCCTATA AAAGTAATAT TGTCTAAGTC TGGGAATATT
CATTTTAATC AGCAAATTTA TCAAGATGAA TCAACACCAA TTTGGATATA TACTGAAAAT
CCAAATTTAA CAAGCAATCA AACACATATT GAAATTATTT ACTTGAAGTC TTGTGATTTA
ACAACAATTC TTCACAATTT ATATAAAAGA GGAGTTGGAA CTTTGCTAGT CGAGGCAGGT
CCAACCACTA CTTCAGAATT TCTCCAATCT AATTATATAG ATGAATTTAT TCTCTATTAT
GCCCCGAAAT TAATTGGCGG ATCTGGAAAT TATCAATTTT ATCAAACAAA TGATGTGATT
GAGATACCAG ATGCGAACCA ATTTGAAATT GTTCATTCCG AGTTATTAAA TCAAAATGTT
AAATTAACTT TACGAAAGAA GTGA
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| Protein sequence | MSQFMDYAIQ LANMVQGQTG VNPPVGAVVV NEGRIVGIGA HLRKGDKHAE VQALDMAQQN
AEGATIYITL EPCSHFGSTP PCVNKIIDCK IAKVVYATKD NSLDTHGDET LRAHGIEVEC
VDDERASQLY QDFFKAKAKQ LPQITVKVSA SLDGKQANDN GQSQWITNKE VKQDVYKLRH
RHDAVLTGRR TVELDDPQYT TRIQDGKNPI KVILSKSGNI HFNQQIYQDE STPIWIYTEN
PNLTSNQTHI EIIYLKSCDL TTILHNLYKR GVGTLLVEAG PTTTSEFLQS NYIDEFILYY
APKLIGGSGN YQFYQTNDVI EIPDANQFEI VHSELLNQNV KLTLRKK
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