Gene SaurJH1_1849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH1_1849 
Symbol 
ID5315235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH1 
KingdomBacteria 
Replicon accessionNC_009632 
Strand
Start bp1941880 
End bp1943061 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content35% 
IMG OID640779927 
Productmajor facilitator transporter 
Protein accessionYP_001316980 
Protein GI150394305 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.200534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAC CTAAATCAGT CTGGTGGCTA GTAATTGGCA TGGCGTTAAA TATTACTGGT 
TCCAGTTTTT TGTGGCCTTT AAATACAATT TATATGAAAC AAGAACTTGG AAAAAGTTTA
ACTGTTGCTG GTTTAGTGCT AATGATAAAT TCATTTGGCA TGGTTATTGG AAACTTATTA
GGTGGTTCAC TATTTGATAA ATTAGGTGGA TACAAGACGA TTTTAATTGG AACTTTCACT
TGTCTTTGTA GTACAACGCT ACTTAATTTC TTTCACGGGT GGCCTTGGTA TGCTGTATGG
CTTGTAATGT TAGGCTTTGG TGGCGGAATG ATTATTCCTG CGATATACGC TATGGCTGGA
GCAGTGTGGC CGAATGGCGG AAGACAAACG TTTAATGCGA TATACTTAGC GCAAAATATT
GGTGTGGCTG TCGGTGCTGC AATGGGCGGC TTTGTCGCAG AATTTAGCTT TAACTATATC
TTTTTAGCCA ATCTTATTAT GTATGTTGTG TTTGCGCTTG TCGCGGTAAC GCAATTTAAT
ATTGAAATTA ATGCGAAAGT TAAATATCCA ACTCATTTAG ATATTACTGG TAAAAAGAAT
AAAGCAAGAT TTATTTCATT AGTACTAATT TGTGCAATGT TTGCAATTTG TTGGGTTGCG
TATATTCAAT GGGAGTCTAC AATCGCATCA TTTACACAAT CTATTAATAT TTCAATGGCA
CAATATAGTG TTTTATGGAC AATTAACGGA ATAATGATTT TAGTAGCACA ACCATTAATT
AAACCGGTTC TCTATCTGTT AAAAGGAAAC TTAAAGAAGC AAATGTTTGT CGGCATCATC
ATTTTTATGT TGTCGTTCTT TGTCACGAGT TTTGCCGAAA ACTTTACAAT ATTTGTTGTC
GGTATGATTA TTTTAACTTT TGGAGAAATG TTTGTATGGC CAGCAGTTCC AACTATAGCC
AATCAGTTAG CGCCAGATGG TAAGCAAGGA CAGTACCAAG GTTTTGTGAA TTCAGCTGCT
ACAGTAGGAA AAGCATTTGG TCCATTTCTT GGTGGTGTAT TAGTTGATGC GTTTAATATG
CGCATGATGT TTATCGGTAT GATGCTACTA CTTGTATTTG CATTAATATT ATTAATGGTT
TTCAAGGAGA ATAATACGCA ACCTAAAAAA ATAGATGCAT AA
 
Protein sequence
MNIPKSVWWL VIGMALNITG SSFLWPLNTI YMKQELGKSL TVAGLVLMIN SFGMVIGNLL 
GGSLFDKLGG YKTILIGTFT CLCSTTLLNF FHGWPWYAVW LVMLGFGGGM IIPAIYAMAG
AVWPNGGRQT FNAIYLAQNI GVAVGAAMGG FVAEFSFNYI FLANLIMYVV FALVAVTQFN
IEINAKVKYP THLDITGKKN KARFISLVLI CAMFAICWVA YIQWESTIAS FTQSINISMA
QYSVLWTING IMILVAQPLI KPVLYLLKGN LKKQMFVGII IFMLSFFVTS FAENFTIFVV
GMIILTFGEM FVWPAVPTIA NQLAPDGKQG QYQGFVNSAA TVGKAFGPFL GGVLVDAFNM
RMMFIGMMLL LVFALILLMV FKENNTQPKK IDA