Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_1849 |
Symbol | |
ID | 5315235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | - |
Start bp | 1941880 |
End bp | 1943061 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640779927 |
Product | major facilitator transporter |
Protein accession | YP_001316980 |
Protein GI | 150394305 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.200534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATAC CTAAATCAGT CTGGTGGCTA GTAATTGGCA TGGCGTTAAA TATTACTGGT TCCAGTTTTT TGTGGCCTTT AAATACAATT TATATGAAAC AAGAACTTGG AAAAAGTTTA ACTGTTGCTG GTTTAGTGCT AATGATAAAT TCATTTGGCA TGGTTATTGG AAACTTATTA GGTGGTTCAC TATTTGATAA ATTAGGTGGA TACAAGACGA TTTTAATTGG AACTTTCACT TGTCTTTGTA GTACAACGCT ACTTAATTTC TTTCACGGGT GGCCTTGGTA TGCTGTATGG CTTGTAATGT TAGGCTTTGG TGGCGGAATG ATTATTCCTG CGATATACGC TATGGCTGGA GCAGTGTGGC CGAATGGCGG AAGACAAACG TTTAATGCGA TATACTTAGC GCAAAATATT GGTGTGGCTG TCGGTGCTGC AATGGGCGGC TTTGTCGCAG AATTTAGCTT TAACTATATC TTTTTAGCCA ATCTTATTAT GTATGTTGTG TTTGCGCTTG TCGCGGTAAC GCAATTTAAT ATTGAAATTA ATGCGAAAGT TAAATATCCA ACTCATTTAG ATATTACTGG TAAAAAGAAT AAAGCAAGAT TTATTTCATT AGTACTAATT TGTGCAATGT TTGCAATTTG TTGGGTTGCG TATATTCAAT GGGAGTCTAC AATCGCATCA TTTACACAAT CTATTAATAT TTCAATGGCA CAATATAGTG TTTTATGGAC AATTAACGGA ATAATGATTT TAGTAGCACA ACCATTAATT AAACCGGTTC TCTATCTGTT AAAAGGAAAC TTAAAGAAGC AAATGTTTGT CGGCATCATC ATTTTTATGT TGTCGTTCTT TGTCACGAGT TTTGCCGAAA ACTTTACAAT ATTTGTTGTC GGTATGATTA TTTTAACTTT TGGAGAAATG TTTGTATGGC CAGCAGTTCC AACTATAGCC AATCAGTTAG CGCCAGATGG TAAGCAAGGA CAGTACCAAG GTTTTGTGAA TTCAGCTGCT ACAGTAGGAA AAGCATTTGG TCCATTTCTT GGTGGTGTAT TAGTTGATGC GTTTAATATG CGCATGATGT TTATCGGTAT GATGCTACTA CTTGTATTTG CATTAATATT ATTAATGGTT TTCAAGGAGA ATAATACGCA ACCTAAAAAA ATAGATGCAT AA
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Protein sequence | MNIPKSVWWL VIGMALNITG SSFLWPLNTI YMKQELGKSL TVAGLVLMIN SFGMVIGNLL GGSLFDKLGG YKTILIGTFT CLCSTTLLNF FHGWPWYAVW LVMLGFGGGM IIPAIYAMAG AVWPNGGRQT FNAIYLAQNI GVAVGAAMGG FVAEFSFNYI FLANLIMYVV FALVAVTQFN IEINAKVKYP THLDITGKKN KARFISLVLI CAMFAICWVA YIQWESTIAS FTQSINISMA QYSVLWTING IMILVAQPLI KPVLYLLKGN LKKQMFVGII IFMLSFFVTS FAENFTIFVV GMIILTFGEM FVWPAVPTIA NQLAPDGKQG QYQGFVNSAA TVGKAFGPFL GGVLVDAFNM RMMFIGMMLL LVFALILLMV FKENNTQPKK IDA
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