| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_1729 |
|---|
| Symbol | tgt |
|---|
| ID | 5315438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | - |
|---|
| Start bp | 1798758 |
|---|
| End bp | 1799897 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640779809 |
|---|
| Product | queuine tRNA-ribosyltransferase |
|---|
| Protein accession | YP_001316862 |
|---|
| Protein GI | 150394187 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.37523 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCAG TAACATACGA ACACATTAAA ACTTGTAAAC AATCAGGTGC GCGTTTAGGT
ATCGTGCACA CACCACACGG TTCATTTGAA ACACCTATGT TTATGCCAGT TGGTACTAAA
GCAACCGTTA AAACAATGAG TCCAGAAGAG TTAAGACAAA TTGAAGCAAA AATCATTTTG
GGCAACACAT ATCATTTGTG GTTACAACCC GGAAATGATA TTATCAAACA CGCTGGGGGA
TTACATAAAT TCATGAATTG GGATGGTCCG ATTCTTACAG ATTCAGGCGG TTTCCAAGTG
TTTAGTTTAA GTAATTTACG TAAAATTACA GAAGAAGGCG TGGAATTTAG ACATCATACT
AATGGGTCTA AATTATTTTT GAGTCCTGAG AAATCAATGC AAATTCAAAA TGATTTAGGA
TCTGATATTA TGATGGCATT TGATGAATGT CCACCGATGC CTGCTGAATA TGATTATGTA
AAAAAATCTA TTGAACGTAC AACACGTTGG GCGAAAAGAT GTCTAGATGC ACACCAAAGA
CCTGAAGATC AAGCATTGTT CGGCATTATA CAAGGTGGCG AATATGAAGA TTTAAGAGAA
CAAAGTGCAA AGGATTTAGT AGAATTAGAT TTTCCTGGTT ATGCAATCGG CGGTTTGTCA
GTTGGTGAAC CTAAACCGGT TATGTATAAA ATGGTTGAAC ATACAGAGCA GTTTATGCCT
AAAGATAAAC CAAGATATTT AATGGGTGTA GGATCTCCAG ATGCGTTAAT CGAATGTAGT
ATTCGCGGCA TGGATATGTT TGATTGTGTC TTACCGACAC GTATTGCCAG AAATGGTACT
TGTATGACAT CGCAAGGTCG TTTAGTTATT AAAAATGCAA AATTTGCAGA TGATTTAAGA
CCGTTAGATG AGAATTGTGA CTGTTATACA TGTCAAAACT ATTCAAGAGC GTATATACGT
CATTTAATCA AGGCAGAGGA AACTTTTGGT ATTCGTCTTA CTACTATTCA TAATTTACAT
TTTCTGCTAA AATTAATGGA AGATATAAGA CAAGCCATTC GAGAAGATCG TCTTTTAGAT
TTCAAAGAAG AATTCTTCGA GCAATATGGA TTAAATGTTG AGAACCCAAA AAACTTTTAA
|
|---|
| Protein sequence | MPAVTYEHIK TCKQSGARLG IVHTPHGSFE TPMFMPVGTK ATVKTMSPEE LRQIEAKIIL
GNTYHLWLQP GNDIIKHAGG LHKFMNWDGP ILTDSGGFQV FSLSNLRKIT EEGVEFRHHT
NGSKLFLSPE KSMQIQNDLG SDIMMAFDEC PPMPAEYDYV KKSIERTTRW AKRCLDAHQR
PEDQALFGII QGGEYEDLRE QSAKDLVELD FPGYAIGGLS VGEPKPVMYK MVEHTEQFMP
KDKPRYLMGV GSPDALIECS IRGMDMFDCV LPTRIARNGT CMTSQGRLVI KNAKFADDLR
PLDENCDCYT CQNYSRAYIR HLIKAEETFG IRLTTIHNLH FLLKLMEDIR QAIREDRLLD
FKEEFFEQYG LNVENPKNF
|
|---|
| |