Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_1710 |
Symbol | |
ID | 5315693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | - |
Start bp | 1774142 |
End bp | 1776619 |
Gene Length | 2478 bp |
Protein Length | 825 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640779790 |
Product | RecD/TraA family helicase |
Protein accession | YP_001316843 |
Protein GI | 150394168 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGACC CTACACTATT TGATTATTCA ATGATCAAAG GTACTGTTGA AGCGATATTG TTTCAAAACA GTGATAATTT TTATACAGTG CTTAAAGTAG ATACTATTGA AACAAATGAA GACTTTGATA CAATGCCAAC TGTTGTAGGG TTTCTTCCGA ATATTGTTGA AGGCGATGTC TACACATTTA AAGGGCAAGT TGTTGATCAT CCACGTTATG GTAAACAATT AAAAGCAGAG ACTTTTGAAA AAGAAATGCC ACAAACGAAA GAAGCAATTA TAAGTTATTT ATCTAGTGAT TTGTTTAAAG GTGTAGGTAA AAAGACAGCT CAAAATATTG TTAATACATT AGGTGACAAT GCGATAAATG ATATATTAGA TGACCATTCA GTGCTAGAAA AAGTTTCGGG ATTATCTAAA AAGAAACAGA AACAAATTGC AGAACAAATT TCAGCAAATC AAGAATCTGA AAAAATAATG ATTCGTTTAC ATGATTTAGG GTTTGGTCCT AAACTTTCAA TGGCAATTTA TCAGTTTTAT CTCGGCGATA CACTGACTAT TTTAGATCGA AATCCATATC AATTGATTTA TGATATTAAA GGTATTGGTT TTAATAAAGC AGATCAACTT GCTAGAAATA TTGGTATCGC TTATAACGAT AATGAACGAT TAAAAGCTGC GTTGCTCTAT ACGTTAGAAG AAGAATGTAT TAAACAGGGA CATACATATT TGCCTATCAA TGTTGTTATA GATTTAACGG TTGATGTATT AAATTATCAA GATGAAGAGG TCATCGAACC TGAAAAATTA GACGAAATGT TGCAATACTT AAATGAGGAA AAACGACTAA TTATTGACAA TGAACAAGTT GCAATTCCAA GTTTGTATTA TTCTGAAATC AAAAGTGTTC AAAACTTATT CAGAATAAAG ACGCATACAA ATAAACTTAC GGAAATTGAA CAGTCAGATT TACAAATGCA TATTGGTGAA ATAGAAGATG CGAATCAAGT GAACTATGCA GCTTCACAAA AAGAAGCTTT GCAAACGGCT ATCAATTCTA AGGTGATGCT ATTAACCGGT GGACCGGGAA CAGGAAAGAC GACAGTAATT AAAGGTATTG TAGAATTATA TGCTGAGATT CATGGCTTAT CATTAGATTA TGATGATTAT GTCAATGATG ATTATCCAGT TGTATTAGCA GCGCCAACAG GAAGAGCGTC TAAGAGACTA CAAGAGTCAA CTGGATTAGA AGCAATGACG ATTCATCGTT TAATAGGTTG GAATCAAGAC ACAAAGCCAG AGGATATATT AGAAAATGAA ATAAACGCAC GACTCATAAT CATTGATGAG ATGTCTATGG TAGATACTTG GTTGTTTCAC CAATTTTTAA GTGCAGTTCC TTTAGATGCA CAATTGATAT TTGTAGGTGA TGAGGACCAA TTGCCTTCTG TAGGTCCTGG TCAAGTATTT AAAGATTTAA TTGAATCGAA AGCTATACCA CGAGTTAATC TGACTGAAGT ATATCGTCAA CAAGATGGTT CAAGCATTAT AGAATTAGCA CATCGAATGA AATTGGGTCA GAAAATTGAT ATTACACAGC GTTTTCATGA TAGAAGTTTT ATTAACTGTC AGGCAAACCA AATACCAACA GTTGTTGAGA AGGTAGTTAC TAGTGCTGTT AATAAAGGGT ATACTATGGC TGATATTCAA GTGCTTGCAC CAATGTATAA AGGAAATGCC GGTATTAAAC GTTTAAATCA AGTTTTACAA GATATTTTAA ACCCTAAAAA GAAAGACACA CGAGAAATTG AGTTTGGTGA TGTAGTCTTT AGAAAAGGTG ACAAAGTATT ACAACTTGTT AATAGGCCAA ATGATAACAT ATTCAATGGT GACATAGGAG TTATTGTTGG TATTTTTTGG GCGAAAGAAA ATGCCCTTAA TAAAGATGTA CTTGTTGTGG ATTTTGAAGG TAATGAAATT ACATTTACGA AACAAGATAT GATGGAATTA ACACATGCTT ATTGTACATC AATCCATAAA TCACAAGGTT CAGAATTTCC TATTGTTATC ATGCCTATTG TTAAACAGTA TTTTAGAATG TTACAAAGAC CGATATTATA TACTGGTTTA ACTAGAGCGA AAACGAGTTT AGTTCTACTT GGTGATCCAG AAGCATTTGA TATTGGATTA AAAACAAATG GTCAAGCGCG TTTAACACAA TTATGTACAT TGTTGAAAAA TTATTTTAAT TCAGAAGATG AAGAAATGCT GGAAAACACA GCAACTAATG ATACAGGAGC TTCACAAACG ACAATAGATG ATCAAGTAGA AGCGCCAATG TCATCGAATG ATAGTGGAGA AGTTACGTCT GATTCAACAA AAACAGATAT AAATGTATTA ACGGAAGCTA CAATGTTTAA AATTGACCCA ATGATTAATA TGGGAGAAAT CACGCCGTAT GACTTTATAG AACGTTGA
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Protein sequence | MSDPTLFDYS MIKGTVEAIL FQNSDNFYTV LKVDTIETNE DFDTMPTVVG FLPNIVEGDV YTFKGQVVDH PRYGKQLKAE TFEKEMPQTK EAIISYLSSD LFKGVGKKTA QNIVNTLGDN AINDILDDHS VLEKVSGLSK KKQKQIAEQI SANQESEKIM IRLHDLGFGP KLSMAIYQFY LGDTLTILDR NPYQLIYDIK GIGFNKADQL ARNIGIAYND NERLKAALLY TLEEECIKQG HTYLPINVVI DLTVDVLNYQ DEEVIEPEKL DEMLQYLNEE KRLIIDNEQV AIPSLYYSEI KSVQNLFRIK THTNKLTEIE QSDLQMHIGE IEDANQVNYA ASQKEALQTA INSKVMLLTG GPGTGKTTVI KGIVELYAEI HGLSLDYDDY VNDDYPVVLA APTGRASKRL QESTGLEAMT IHRLIGWNQD TKPEDILENE INARLIIIDE MSMVDTWLFH QFLSAVPLDA QLIFVGDEDQ LPSVGPGQVF KDLIESKAIP RVNLTEVYRQ QDGSSIIELA HRMKLGQKID ITQRFHDRSF INCQANQIPT VVEKVVTSAV NKGYTMADIQ VLAPMYKGNA GIKRLNQVLQ DILNPKKKDT REIEFGDVVF RKGDKVLQLV NRPNDNIFNG DIGVIVGIFW AKENALNKDV LVVDFEGNEI TFTKQDMMEL THAYCTSIHK SQGSEFPIVI MPIVKQYFRM LQRPILYTGL TRAKTSLVLL GDPEAFDIGL KTNGQARLTQ LCTLLKNYFN SEDEEMLENT ATNDTGASQT TIDDQVEAPM SSNDSGEVTS DSTKTDINVL TEATMFKIDP MINMGEITPY DFIER
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