| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_1709 |
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| Symbol | alaS |
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| ID | 5315692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus aureus subsp. aureus JH1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009632 |
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| Strand | - |
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| Start bp | 1771169 |
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| End bp | 1773799 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640779789 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001316842 |
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| Protein GI | 150394167 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.314343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT TAAAAGCGAG TGAAATTAGA CAAAAATATC TAGATTTCTT TGTTGAAAAA
GGACATATGG TTGAACCTTC TGCACCATTA GTGCCAATTG ATGATGATAC ATTATTATGG
ATTAATTCAG GTGTAGCAAC ATTAAAGAAA TATTTTGATG GACGTGAAAC ACCTAAAAAG
CCAAGAATTG TAAACTCTCA AAAAGCTATT CGTACAAATG ATATTGAAAA TGTTGGTTTC
ACAGCGCGTC ACCATACATT CTTTGAAATG TTAGGTAACT TCTCAATTGG TGATTATTTT
AAACAAGAAG CGATTGAATT TGCTTGGGAA TTTTTAACGA GTGATAAATG GATGGGTATG
GAGCCAGATA AATTGTACGT TACGATTCAT CCGGAAGATA TGGAAGCATA TAACATTTGG
CATAAAGATA TTGGGCTTGA AGAAAGTCGT ATTATTCGCA TTGAAGGTAA CTTCTGGGAT
ATTGGTGAAG GGCCTTCAGG ACCGAACACT GAGATTTTCT ATGATCGCGG AGAAGCATAT
GGACAAGACG ATCCGGCAGA AGAAATGTAT CCAGGTGGAG AAAATGAACG CTATCTTGAA
GTATGGAACT TAGTATTTAG TGAATTCAAT CATAATAAAG ATCATAGTTA CACACCATTA
CCTAATAAAA ATATTGATAC CGGCATGGGG CTTGAGCGTA TGGCCTCAGT TTCTCAAAAT
GTACGTACTA ACTATGAAAC AGATTTATTT ATGCCTATAA TGAATGAAAT CGAAAAAGTA
TCAGGTAAAC AATATTTAGT AAACAACGAA CAAGATGTGG CATTTAAAGT AATTGCTGAC
CACATTCGTA CGATTGCATT TGCAATTTCT GATGGTGCAT TACCTGCCAA TGAAGGTAGA
GGATATGTAT TACGTCGATT GTTACGTCGT GCCGTTCGTT TTAGTCAAAC GTTAGGAATC
AATGAGCCAT TTATGTACAA ACTTGTTGAT ATTGTTGCAG ACATTATGGA ACCATATTAT
CCAAATGTTA AGGAAAAAGC AGATTTCATT AAGCGTGTTA TAAAGTCTGA AGAAGAACGA
TTCCATGAAA CATTAGAAGA TGGTTTAGCG ATTTTAAATG AATTAATTAA AAAAGCTAAA
GCGACAACAA ATGAAATTAA TGGGAAAGAT GCATTTAAAT TGTATGATAC GTACGGGTTC
CCAATTGAAT TAACTGAAGA AATAGCAGTG CAAGCAGGAT TGAAAGTTGA TATGACAACA
TTTGAGTCAG AAATGCAACA ACAACGTGAT CGTGCACGTC AAGCACGTCA AAATTCTCAA
TCAATGCAAG TTCAAAGTGA AGTATTGAAA AATATTACAT CTGCAAGTAC TTTTGTTGGT
TATGATACTG CGACAGCTCA AACAACACTA ACACACTTGA TATATAATGG TGAAGAAGTT
TCACAAGTTG AAGCGGGTGA AACAGTATAC TTCATGTTAA CGGAAACACC ATTTTATGCA
GTCAGTGGTG GACAAGTTGC GGATACAGGT ATTGTTTATA ATGACAATTT TGAAATTGCT
GTTAGTGAAG TAACCAAAGC ACCAAATGGT CAAAACTTGC ATAAAGGAGT AGTACAATTT
GGCCAAGTAA ATGTTGGCGC TACAGTGTCT GCTGAAGTGA ACCAAAATGA TCGACGTGAC
ATTCAAAAGA ACCATAGTGC AACACATTTA TTACATGCAG CGTTGAAATC AGTACTGGGT
GATCATGTTA ACCAAGCTGG TTCACTAGTA GAAGCAGATC GTTTACGTTT TGATTTCTCT
CATTTTGGTC CAATGACTAA TGATGAAATT GATCAAGTTG AACGCTTAGT AAATGAAGAA
ATTTGGAAAG GTATTGACGT TAACATTCAA GAAATGGATA TTGCTTCAGC TAAAGAAATG
GGCGCAATGG CATTATTCGG TGAAAAATAT GGTGATGTTG TGCGTGTAGT AAATATGGCA
CCATTTTCAA TTGAATTATG TGGTGGTATT CATGTCCGCA ATACTTCTGA AATTGGCTTA
TTCAAAATAG TAAGTGAGTC AGGTACAGGA GCTGGTGTGC GTCGTATTGA AGCATTAACA
GGTAAAGCAG CTTTCTTATA TTTAGAAGAT ATTCAAGAGA AATTTAATAC GATGAAATCA
CAGATGAAAG TGAAATCTGA TGATCAAGTA GTCGAAAAGT TAACACAATT ACAAGATGAA
GAAAAAGCAT TATTAAAACA ATTAGAGCAA CGTGACAAAG AAATCACATC ACTTAAAATG
GGTAATATTG AAGATCAAGT TGAAGAAATC AATGGCTATA AAGTATTGGT TACTGAAGTG
GATGTACCAA ATGCGAAAGC AATTCGCTCG ACAATGGATG ATTTTAAATC TAAACTACAA
GATACAATTA TCATTCTTGC AAGTAATGTT GATGATAAAG TATCGATGGT TGCAACTGTC
CCTAAATCTT TAACAAATAA CGTTAAAGCC GGTGATCTTA TCAAACAAAT GGCACCAATC
GTTGGTGGTA AAGGTGGCGG TCGTCCAGAT ATGGCTCAAG GTGGCGGTAC ACAACCTGAA
AATATCTCAA AATCATTAAG CTTTATTAAA GATTACATTA AAAATCTATA A
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| Protein sequence | MKKLKASEIR QKYLDFFVEK GHMVEPSAPL VPIDDDTLLW INSGVATLKK YFDGRETPKK
PRIVNSQKAI RTNDIENVGF TARHHTFFEM LGNFSIGDYF KQEAIEFAWE FLTSDKWMGM
EPDKLYVTIH PEDMEAYNIW HKDIGLEESR IIRIEGNFWD IGEGPSGPNT EIFYDRGEAY
GQDDPAEEMY PGGENERYLE VWNLVFSEFN HNKDHSYTPL PNKNIDTGMG LERMASVSQN
VRTNYETDLF MPIMNEIEKV SGKQYLVNNE QDVAFKVIAD HIRTIAFAIS DGALPANEGR
GYVLRRLLRR AVRFSQTLGI NEPFMYKLVD IVADIMEPYY PNVKEKADFI KRVIKSEEER
FHETLEDGLA ILNELIKKAK ATTNEINGKD AFKLYDTYGF PIELTEEIAV QAGLKVDMTT
FESEMQQQRD RARQARQNSQ SMQVQSEVLK NITSASTFVG YDTATAQTTL THLIYNGEEV
SQVEAGETVY FMLTETPFYA VSGGQVADTG IVYNDNFEIA VSEVTKAPNG QNLHKGVVQF
GQVNVGATVS AEVNQNDRRD IQKNHSATHL LHAALKSVLG DHVNQAGSLV EADRLRFDFS
HFGPMTNDEI DQVERLVNEE IWKGIDVNIQ EMDIASAKEM GAMALFGEKY GDVVRVVNMA
PFSIELCGGI HVRNTSEIGL FKIVSESGTG AGVRRIEALT GKAAFLYLED IQEKFNTMKS
QMKVKSDDQV VEKLTQLQDE EKALLKQLEQ RDKEITSLKM GNIEDQVEEI NGYKVLVTEV
DVPNAKAIRS TMDDFKSKLQ DTIIILASNV DDKVSMVATV PKSLTNNVKA GDLIKQMAPI
VGGKGGGRPD MAQGGGTQPE NISKSLSFIK DYIKNL
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