| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_1641 |
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| Symbol | |
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| ID | 5317663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus aureus subsp. aureus JH1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009632 |
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| Strand | - |
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| Start bp | 1707995 |
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| End bp | 1709458 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640779723 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001316776 |
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| Protein GI | 150394101 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.423795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATAG ACAAACAATT TTGGAAAACA ATATATTATT GGATTAGGTA CTTGAATTTT
GATATTGTCA ATAGGGAAAA AGATGACCAA GAAATTTGGT TAGCCCATAA AAGAAAAAAA
CAAGTAGTCA TTTTTAAACA ACATATCAAG TCTACCCAAG AAATACGTTT TGACAAAGCG
AAAGTGCTTG AACACAAAGA TGAAATAGCA AATTTTATTT CTTTCGAACC ACAAAGTTTT
GAATTTTATT ATTTTACAGA ATCGGAATTT TCAGAAGAAC AATTAAATGA AGTTTCGCCA
ATTAGAATTA AATTCAATGT TATAAGACAC ACAAAAGATT TGATAAAGCA TATGCCGAAT
ATATTTTTGG CTAGACTTAT TTCAGAAGAT AATGATAAAA AGACATATAT GTTCTATAAA
CGCAAAGTAT TAACCGATAA CTTTTTAGAT AAATATATGC AGAAATTTTC ACCGGCAACA
TACACAATAA TATTTGTAAA TGTCTTAATA TGGTTATGTA TGATTTTATA TTTAAATAAT
TTTTCGGATG TAAAATTATT AGATGTTGGC GGGTTAGTGC ATTTTAATGT CGTACATGGT
GAATGGTATC GAATTGTTAC ATCGATGTTT TTACATTTTA GTTTTGAACA TATACTTATG
AATATGCTTT CATTATTTAT TTTTGGTAAA ATAGTCGAAG CAATTATTGG TTCATGGCGG
ATGTTAACTG TATACTTTAT TGCAGGGTTG TTTGGAAACT TTGTATCACT ATCATTTAAT
ACGACTACAA TTTCAGTTGG GGCTAGTGGT GCTATATTTG GTCTGATTGG ATCAATTTTT
GCGATGATGT ATGTTTCAAA AACATTTAAC AAAAAAATGT TAGGACAGTT ATTAATTGCA
TTAGTGATAT TAGTTGGTGT TTCTCTGTTT ATGTCAAATA TAAATATTGT GGCGCATATT
GGAGGATTCA TTGGTGGTTT ATTAATAACT TTAATTGGCT ATTACTATAA AGTGAATCGT
AATATTTTTT GGATTTTACT AATTGGTATG CTTGTTATAT TTATTGCACT TCAAATTAGA
ATTTTTACAA TTAAAGAAGA TAATATTTAT AATAAATTGA TCAAAGATGA TATGACTAGT
GGTAATTATG ATAATGCTCA AAATATTGTG AAGCAGACAA TAAATAAAAA TTATGCCGAT
GATCAAACAT ATTATTTAAG TGGTATGATT ATGGCTACTA TCAATTCTAA GTCCGAAGGT
ATGACAGAAT GGGAGCGAGG ACTTAGAATG TTTCCTAAAT CAGGTTTATT AAATTTTGAG
TTAGCGATAG CAAATCGTTC ATTAAATGAT GATGAAAAAG CATTAAAATA TGTGCGTAAA
GCATTAAATG CAGACCCTAA AAATACAGAT TATATTAACT TAGAAAAAGA GTTGACTAAA
TCAAATGAGT CGAAAAATAA ATAA
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| Protein sequence | MNIDKQFWKT IYYWIRYLNF DIVNREKDDQ EIWLAHKRKK QVVIFKQHIK STQEIRFDKA
KVLEHKDEIA NFISFEPQSF EFYYFTESEF SEEQLNEVSP IRIKFNVIRH TKDLIKHMPN
IFLARLISED NDKKTYMFYK RKVLTDNFLD KYMQKFSPAT YTIIFVNVLI WLCMILYLNN
FSDVKLLDVG GLVHFNVVHG EWYRIVTSMF LHFSFEHILM NMLSLFIFGK IVEAIIGSWR
MLTVYFIAGL FGNFVSLSFN TTTISVGASG AIFGLIGSIF AMMYVSKTFN KKMLGQLLIA
LVILVGVSLF MSNINIVAHI GGFIGGLLIT LIGYYYKVNR NIFWILLIGM LVIFIALQIR
IFTIKEDNIY NKLIKDDMTS GNYDNAQNIV KQTINKNYAD DQTYYLSGMI MATINSKSEG
MTEWERGLRM FPKSGLLNFE LAIANRSLND DEKALKYVRK ALNADPKNTD YINLEKELTK
SNESKNK
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