Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_1585 |
Symbol | |
ID | 5315138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | - |
Start bp | 1660755 |
End bp | 1661642 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640779668 |
Product | tyrosine recombinase XerD |
Protein accession | YP_001316721 |
Protein GI | 150394046 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACAA TTATTGAAGA ATATTTGCGT TTTATACAAA TTGAAAAAGG ACTAAGTTCT AACACAATTG GTGCTTATAG ACGTGATTTG AAAAAGTATC AAGATTATAT GACTGAACAT CATATCTCGC ATATTGATTT TATAGATCGA CAATTAATTC AAGAGTGTTT GGGGCATTTA ATAGACCAAG GGCAATCTGC TAAATCTATT GCGCGATTTA TTTCAACAAT CCGTAGTTTT CATCAATTTG CTATAAGAGA AAAATATGCG GCGAAAGATC CAACGGTATT ATTAGATTCA CCAAAATATG ACAAAAAATT GCCTGACGTT TTAAATGTTG ACGAAGTATT GGCTTTATTA GAAACGCCAG ATTTAAATAA AATTAATGGA TATCGTGATC GTACGATGTT AGAACTTCTG TACGCAACGG GAATGCGTGT ATCTGAATTG ATACATTTAG AGTTAGAAAA CGTGAACTTA ATAATGGGAT TTGTACGCGT ATTTGGTAAA GGCGATAAAG AAAGAATTGT ACCATTAGGC GACGCAGTCA TTGAGTACTT AACTACTTAT ATTGAAACGA TTAGACCGCA ACTTTTAAAA AAGACTGTTA CTGAAGTCTT ATTTTTAAAT ATGCATGGTA AACCTTTATC ACGACAAGCA ATATGGAAAA TGATTAAACA AAATGGCGTA AAGGCAAACA TTAAAAAGAC GTTAACGCCA CATACGTTAC GCCACTCTTT TGCGACACAT TTATTGGAAA ATGGCGCAGA TTTAAGAGCA GTGCAAGAGA TGTTAGGTCA CTCTGACATA TCTACTACCC AACTCTATAC ACATGTTTCG AAATCTCAAA TTAGAAAAAT GTATAACCAA TTTCATCCTA GAGCATAA
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Protein sequence | METIIEEYLR FIQIEKGLSS NTIGAYRRDL KKYQDYMTEH HISHIDFIDR QLIQECLGHL IDQGQSAKSI ARFISTIRSF HQFAIREKYA AKDPTVLLDS PKYDKKLPDV LNVDEVLALL ETPDLNKING YRDRTMLELL YATGMRVSEL IHLELENVNL IMGFVRVFGK GDKERIVPLG DAVIEYLTTY IETIRPQLLK KTVTEVLFLN MHGKPLSRQA IWKMIKQNGV KANIKKTLTP HTLRHSFATH LLENGADLRA VQEMLGHSDI STTQLYTHVS KSQIRKMYNQ FHPRA
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