Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_1551 |
Symbol | |
ID | 5317563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | - |
Start bp | 1626521 |
End bp | 1627765 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640779634 |
Product | TPR repeat-containing protein |
Protein accession | YP_001316687 |
Protein GI | 150394012 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.261583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGATA TCTATAAATT AATAGACGAT ATCAATCTAC AAAAACTAGA AAATTTAGAC TCTCGTGTTA ATGAAGCAAT AACTACTGAC AACGATGACG CATTATTTAT TCTAGGAGAG ACACTTTACA ATTTTGGATT AATGCCACAA GGTTTGGAAG TATTCCGCGT GTTATATCAC AAATATCCAG ACGAAAGTGA ATTGCTGATT TATTTTATTG AAGGTTTAAT GTCTGAAAAT CAAACTGACG AAGCGTTAGA ATATTTAAGT TATGTTGAAC CATCACCTGA AAAGTTGATG TTAGAAGCAG ATTTATATCA ACAAATTAAT ATGATGGAAG TTGCTATTGA TAAATTACAA GAAGCACTTG AACTAGAGCC AAATGATCCA ATAATCCATT TTGCATTGGC TGAAATGTTA TATTATGATG GTCAATATTT ACGTGCTACC TCTGAATACG AAACCGTTTT AGAAACTGGT GAATATCAAG TTAATGGTGT AAACTTATTC TCTCGTATGG CAGATTGTAG TTTACAAAGT GGTAACTATA GTGATGCGAT TCGCTTATAC GATGAAATTA ATGAAGATGA AATGACTTCA GAAGATTATC TCAAAAAAGC CATTTCTTAC GATAAAAATG ACATCACTCA AGAAGCAATT AAAATAATGA CTACATTACT TTCTAAAGAT CCTGATTATA TTCAAGGCTA CTTGTATTTA CAATCATTAT ATGAAAATGA AAAAAATTAT CCAGATGCCA TTGAGACGGG TAAAGAAGGA TTACGACTAA GTCAATTTTA TAAAGAGTTA ATGTATACAA CTGGATGTTT GGAAATAGAA CACGGCGATG CTAATGAAGG TGTATTATTG TTAAAACAAG CATTAGAGGT TGATAATGCT TACCAAGAAC CTTTATTGAT TTTAAGCGAT TTATATCGTA ATGAAGAAGA TTATGAAGCA ATCATTGAAT TATTAACATA TGTAGATGAA GAAGATTTGG ATCCTACATT CATGTGGCAT TTAGCGTTCG CCTATGGTCA AGAAGAGCGA GATAAAGAAG CTCAACATTT CTTTGAATTA GCATATCCAA CGATGAAAAC AAATATTGAT TTTATGAGTG ATTATTATTT CTATTTAATT GAAATTGGTC AAAAGGAACA AGCAATTACT ATTTTAAATC AATTGTTGGA ACTAGAGCCA AGTAACGAAA ATTGGCATGA CGAATTATCA AGATTGCAAT CTTAA
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Protein sequence | MEDIYKLIDD INLQKLENLD SRVNEAITTD NDDALFILGE TLYNFGLMPQ GLEVFRVLYH KYPDESELLI YFIEGLMSEN QTDEALEYLS YVEPSPEKLM LEADLYQQIN MMEVAIDKLQ EALELEPNDP IIHFALAEML YYDGQYLRAT SEYETVLETG EYQVNGVNLF SRMADCSLQS GNYSDAIRLY DEINEDEMTS EDYLKKAISY DKNDITQEAI KIMTTLLSKD PDYIQGYLYL QSLYENEKNY PDAIETGKEG LRLSQFYKEL MYTTGCLEIE HGDANEGVLL LKQALEVDNA YQEPLLILSD LYRNEEDYEA IIELLTYVDE EDLDPTFMWH LAFAYGQEER DKEAQHFFEL AYPTMKTNID FMSDYYFYLI EIGQKEQAIT ILNQLLELEP SNENWHDELS RLQS
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