| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_1548 |
|---|
| Symbol | |
|---|
| ID | 5317560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | - |
|---|
| Start bp | 1624603 |
|---|
| End bp | 1625301 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640779631 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001316684 |
|---|
| Protein GI | 150394009 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2738] Predicted Zn-dependent protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0213988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCTTCAA TTTTTACTAT GATAATTTAT TTCGTAATAT TAATGGTGCT TCCTTTATGG
GCACAACACA AAGTTAAATC TAACTATGAG AAATATTCAC AAGTTAGATC AACTAGTGGT
AAAACGGGTC GTGAAGTTGC ATTAGAAATT TTACATGCAA ACGGTATTTA TGATGTCGAA
GTTGTTAAAG GTGAAGGATT CTTAACAGAT CATTACGATC CTAAAAAGAA AGTTGTTTCA
CTATCTCCTG CAAACTATGA CAGACCATCA GTTGCTGGAA CTGCAATTGC AGCCCACGAA
GTTGGTCATG CCATTCAAGA TCACCAAGGA TATTGGTTCT TAAGATTCAG AGCAGCATTA
GTACCTGTTG CAAACCTAGG GAGTTCATTA AGTTATATGA TCATCATGTT AGGTATTATC
TTAACAGCGA TAGGTAGTGC ATTTGGTTCA ACTGCTTTAT GGATTGGTGC TGGTTTAATG
TCATTAGCGG TATTATTCTC AATTGTTACG TTACCAGTTG AGTTTGATGC GAGTTCAAGA
GCGATGAAAC AAATTACGGC ATTGAACATT GTAAATGAAA AAGAATACAA GCATGCGCGT
AAAGTATTAT CTGCAGCAGC AATGACTTAT GTTGCAGCAA CTGCTGTCGC TGTAGCAGAG
CTTGTACGTA TTATTTTGAT TGCGCGTTCA AGTGATTAA
|
|---|
| Protein sequence | MSSIFTMIIY FVILMVLPLW AQHKVKSNYE KYSQVRSTSG KTGREVALEI LHANGIYDVE
VVKGEGFLTD HYDPKKKVVS LSPANYDRPS VAGTAIAAHE VGHAIQDHQG YWFLRFRAAL
VPVANLGSSL SYMIIMLGII LTAIGSAFGS TALWIGAGLM SLAVLFSIVT LPVEFDASSR
AMKQITALNI VNEKEYKHAR KVLSAAAMTY VAATAVAVAE LVRIILIARS SD
|
|---|
| |