Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_1490 |
Symbol | |
ID | 5316865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 1531183 |
End bp | 1532448 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640779573 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_001316626 |
Protein GI | 150393951 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00291349 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGTTA AATATAATCA AAATGGCGAA TTAACAATGG ATGGTATTAG TTTAAAAACG ATTGCACAAA GCTTTGGTAC ACCTACCATT GTTTATGATG AACTACAAAT TAGAGAACAG ATGCGCCGTT ACCATCGCGC ATTTAAAGAT AGTGGATTAA AATACAATAT TTCATACGCC TCAAAGGCAT TTACTTGCAT TCAAATGGTC AAACTTGTAG CTGAGGAAGA TTTACAGTTA GATGTTGTTT CTGAAGGTGA ATTATATACA GCTTTAGAAG CAGGTTTTGA ACCGAGTCGC ATCCATTTCC ATGGTAACAA TAAAACGAAA CATGAAATTA GGTATGCTTT AGAAAATAAT ATCGGTTATT TTGTTATAGA TTCATTAGAA GAAATTGAAT TAATAGACCG CTATGCTAAT GATACGGTTC AAGTTGTATT ACGAGTTAAT CCAGGTGTTG AAGCACATAC ACACGAATTT ATTCAAACTG GGCAAGAAGA TAGTAAGTTT GGATTATCAA TTCAATATGG CTTAGCTAAA AAAGCAATTG ACAAAGTCCA ACAATCTAAA CACTTAAAAT TAAAAGGTGT ACATTGTCAT ATTGGTTCAC AGATTGAAGG TACAGAAGCA TTTATTGAAA CTGCTAAAAT TGTTTTACGT TGGCTTAAAG AGCAAGGCAT TCAAGTTGAA TTATTAAACC TTGGTGGTGG CTTTGGTATT AAATATGTTG AAGGTGACGA AAGTTTCCCT ATCGAAAGTG GTATTAAAGA TATTACAGAC GCAATAAAAT CCGAAATTAA AGTTCTAGGT ATAGATGCAC CAGAAATAGG TATTGAACCG GGACGATCAA TTGTAGGTGA AGCTGGCGTT ACTTTATATG AAGTTGGAAC CATTAAAGAA ATTCCAGAGA TTAATAAATA TGTTTCAATC GATGGCGGTA TGAGTGATCA TATCAGAACT GCACTTTATG ACGCAAAGTA TCAAGCATTG CTTGTTAATA GAAATGAAGA AGCAGATGAC AGTGTAACTA TAGCTGGAAA ATTATGTGAG TCTGGTGATA TCATTATTAA AGACGCTAAA TTACCTTCAT CAGTCAAACG TGGAGACTAT CTTGCTATAT TATCAACTGG TGCATATCAT TACTCTATGG CATCCAATTA CAATCAAATG CAAAAGCCTT CTGTGTTTTT CTTAAAAGAT GGCAAAGCAC GTGAAGTTAT AAAGCGACAA TCGTTAAGAC AACTCATTAT TAATGATACA AAATAA
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Protein sequence | MTVKYNQNGE LTMDGISLKT IAQSFGTPTI VYDELQIREQ MRRYHRAFKD SGLKYNISYA SKAFTCIQMV KLVAEEDLQL DVVSEGELYT ALEAGFEPSR IHFHGNNKTK HEIRYALENN IGYFVIDSLE EIELIDRYAN DTVQVVLRVN PGVEAHTHEF IQTGQEDSKF GLSIQYGLAK KAIDKVQQSK HLKLKGVHCH IGSQIEGTEA FIETAKIVLR WLKEQGIQVE LLNLGGGFGI KYVEGDESFP IESGIKDITD AIKSEIKVLG IDAPEIGIEP GRSIVGEAGV TLYEVGTIKE IPEINKYVSI DGGMSDHIRT ALYDAKYQAL LVNRNEEADD SVTIAGKLCE SGDIIIKDAK LPSSVKRGDY LAILSTGAYH YSMASNYNQM QKPSVFFLKD GKAREVIKRQ SLRQLIINDT K
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