Gene SaurJH1_1490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH1_1490 
Symbol 
ID5316865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH1 
KingdomBacteria 
Replicon accessionNC_009632 
Strand
Start bp1531183 
End bp1532448 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content34% 
IMG OID640779573 
Productdiaminopimelate decarboxylase 
Protein accessionYP_001316626 
Protein GI150393951 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID[TIGR01048] diaminopimelate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00291349 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTTA AATATAATCA AAATGGCGAA TTAACAATGG ATGGTATTAG TTTAAAAACG 
ATTGCACAAA GCTTTGGTAC ACCTACCATT GTTTATGATG AACTACAAAT TAGAGAACAG
ATGCGCCGTT ACCATCGCGC ATTTAAAGAT AGTGGATTAA AATACAATAT TTCATACGCC
TCAAAGGCAT TTACTTGCAT TCAAATGGTC AAACTTGTAG CTGAGGAAGA TTTACAGTTA
GATGTTGTTT CTGAAGGTGA ATTATATACA GCTTTAGAAG CAGGTTTTGA ACCGAGTCGC
ATCCATTTCC ATGGTAACAA TAAAACGAAA CATGAAATTA GGTATGCTTT AGAAAATAAT
ATCGGTTATT TTGTTATAGA TTCATTAGAA GAAATTGAAT TAATAGACCG CTATGCTAAT
GATACGGTTC AAGTTGTATT ACGAGTTAAT CCAGGTGTTG AAGCACATAC ACACGAATTT
ATTCAAACTG GGCAAGAAGA TAGTAAGTTT GGATTATCAA TTCAATATGG CTTAGCTAAA
AAAGCAATTG ACAAAGTCCA ACAATCTAAA CACTTAAAAT TAAAAGGTGT ACATTGTCAT
ATTGGTTCAC AGATTGAAGG TACAGAAGCA TTTATTGAAA CTGCTAAAAT TGTTTTACGT
TGGCTTAAAG AGCAAGGCAT TCAAGTTGAA TTATTAAACC TTGGTGGTGG CTTTGGTATT
AAATATGTTG AAGGTGACGA AAGTTTCCCT ATCGAAAGTG GTATTAAAGA TATTACAGAC
GCAATAAAAT CCGAAATTAA AGTTCTAGGT ATAGATGCAC CAGAAATAGG TATTGAACCG
GGACGATCAA TTGTAGGTGA AGCTGGCGTT ACTTTATATG AAGTTGGAAC CATTAAAGAA
ATTCCAGAGA TTAATAAATA TGTTTCAATC GATGGCGGTA TGAGTGATCA TATCAGAACT
GCACTTTATG ACGCAAAGTA TCAAGCATTG CTTGTTAATA GAAATGAAGA AGCAGATGAC
AGTGTAACTA TAGCTGGAAA ATTATGTGAG TCTGGTGATA TCATTATTAA AGACGCTAAA
TTACCTTCAT CAGTCAAACG TGGAGACTAT CTTGCTATAT TATCAACTGG TGCATATCAT
TACTCTATGG CATCCAATTA CAATCAAATG CAAAAGCCTT CTGTGTTTTT CTTAAAAGAT
GGCAAAGCAC GTGAAGTTAT AAAGCGACAA TCGTTAAGAC AACTCATTAT TAATGATACA
AAATAA
 
Protein sequence
MTVKYNQNGE LTMDGISLKT IAQSFGTPTI VYDELQIREQ MRRYHRAFKD SGLKYNISYA 
SKAFTCIQMV KLVAEEDLQL DVVSEGELYT ALEAGFEPSR IHFHGNNKTK HEIRYALENN
IGYFVIDSLE EIELIDRYAN DTVQVVLRVN PGVEAHTHEF IQTGQEDSKF GLSIQYGLAK
KAIDKVQQSK HLKLKGVHCH IGSQIEGTEA FIETAKIVLR WLKEQGIQVE LLNLGGGFGI
KYVEGDESFP IESGIKDITD AIKSEIKVLG IDAPEIGIEP GRSIVGEAGV TLYEVGTIKE
IPEINKYVSI DGGMSDHIRT ALYDAKYQAL LVNRNEEADD SVTIAGKLCE SGDIIIKDAK
LPSSVKRGDY LAILSTGAYH YSMASNYNQM QKPSVFFLKD GKAREVIKRQ SLRQLIINDT
K