| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_1463 |
|---|
| Symbol | trpA |
|---|
| ID | 5316584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | + |
|---|
| Start bp | 1502608 |
|---|
| End bp | 1503336 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640779547 |
|---|
| Product | tryptophan synthase subunit alpha |
|---|
| Protein accession | YP_001316600 |
|---|
| Protein GI | 150393925 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAT TATTTATACC TTATATTATG GGCAATAAAG ATTTGATTGA AAATGCAACA
TTGTTGAGTG AAAATGGTGC AGATATAATT GAAATTGGTG TACCTTTCTC TGATCCGGTT
GCTGATGGTC CAGTTATCAT GGAAGCAGGT CAACAAGCGA TTAAACAAGG CATCACGATA
GATTATATTT TCAATCAATT AGAAAAACAT GGTGATCAAA TTAAGTGTAA CTATGTATTA
ATGACGTATT ATAATATTAT TTGTCATTAT GGAGAACAAG CGTTTTTTGA AAAATGTCGA
GATACTGGTG TCTACGGCTT AATTATTCCT GATTTACCAT ATGAATTATC GCAGCGTTTA
AAACAACAAT TTAGTCACTA TGGCGTCAAA ATCATATCGT TAGTTGCGAT GACTACTGAT
GACAAACGTA TAAAAGATAT CGTATCTCAT GCGGAAGGCT TTATTTATAC TGTGACGATG
AATGCGACAA CAGGACAAAA CGGTGCGTTT CATCCAGAAT TAAAACGAAA AATTGAGTCA
ATTAAAGCGA TAGCCAATGT GCCAGTTGTC GCAGGATTTG GTATAAGAAC ACCACAACAT
GTTGCAGATA TAAAAGAGGT TGCAGATGGC ATCGTCATTG GTAGCGAAAT CGTTAAGCGA
TTTAAATCTA ACACGCGTGA GGAAATCATT AGATATTTAC AATCTATCCA ACAAACATTG
AATAATTAA
|
|---|
| Protein sequence | MTKLFIPYIM GNKDLIENAT LLSENGADII EIGVPFSDPV ADGPVIMEAG QQAIKQGITI
DYIFNQLEKH GDQIKCNYVL MTYYNIICHY GEQAFFEKCR DTGVYGLIIP DLPYELSQRL
KQQFSHYGVK IISLVAMTTD DKRIKDIVSH AEGFIYTVTM NATTGQNGAF HPELKRKIES
IKAIANVPVV AGFGIRTPQH VADIKEVADG IVIGSEIVKR FKSNTREEII RYLQSIQQTL
NN
|
|---|
| |