| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_1443 |
|---|
| Symbol | |
|---|
| ID | 5315161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | + |
|---|
| Start bp | 1478788 |
|---|
| End bp | 1480779 |
|---|
| Gene Length | 1992 bp |
|---|
| Protein Length | 663 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640779527 |
|---|
| Product | DNA topoisomerase IV subunit B |
|---|
| Protein accession | YP_001316580 |
|---|
| Protein GI | 150393905 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
|---|
| TIGRFAM ID | [TIGR01058] DNA topoisomerase IV, B subunit, Gram-positive
[TIGR01059] DNA gyrase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0710964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAC AAAATAATTA TTCAGATGAT TCAATACAGG TTTTAGAGGG GTTAGAAGCA
GTTCGTAAAA GACCTGGTAT GTATATTGGA TCAACTGATA AACGGGGATT ACATCATCTA
GTATATGAAA TTGTCGATAA CTCCGTCGAT GAAGTATTGA ATGGTTACGG TAACGAAATA
GATGTAACAA TTAATAAAGA TGGTAGTATT TCTATAGAAG ATAATGGACG TGGTATGCCA
ACAGGTATAC ATAAATCAGG TAAACCGACA GTCGAAGTTA TCTTTACTGT TTTACATGCA
GGAGGTAAAT TTGGACAAGG CGGCTATAAA ACTTCAGGTG GTCTTCACGG TGTTGGTGCT
TCAGTTGTAA ATGCATTGAG TGAATGGCTT GAAGTTGAAA TCCATCGAGA TGGTAGTATA
TATCATCAAA GTTTTAAAAA CGGTGGTTCG CCATCTTCTG GTTTAGTGAA AAAAGGTAAA
ACTAAGAAAA CAGGTACCAA AGTAACATTT AAACCTGATG ACACAATTTT TAAAGCATCT
ACATCATTTA ATTTTGATGT TTTAAGCGAA CGACTACAAG AGTCTGCGTT CTTATTGAAA
AATTTAAAAA TAACGCTTAA TGATTTACGC AGTGGTAAAG AGCGTCAAGA GCATTACCAT
TATGAAGAAG GAATCAAAGA GTTTGTTAGT TATGTCAATG AAGGAAAAGA AGTTTTGCAT
GACGTGGCTA CATTTTCAGG TGAAGCAAAT GGTATAGAGG TAGACGTAGC TTTCCAATAT
AATGATCAAT ATTCAGAAAG TATTTTAAGT TTTGTAAATA ATGTACGTAC TAAAGATGGT
GGTACACATG AAGTTGGTTT TAAAACAGCA ATGACACGTG TATTTAATGA TTATGCACGT
CGTATTAATG AACTTAAAAC AAAAGATAAA AACTTAGATG GTAATGATAT TCGTGAAGGT
TTAACAGCTG TTGTGTCTGT TCGTATTCCA GAAGAATTAT TACAATTTGA AGGACAAACG
AAATCTAAAT TGGGTACTTC TGAAGCTAGA AGTGCTGTTG ATTCAGTTGT TGCAGACAAA
TTGCCATTCT ATTTAGAAGA AAAAGGACAA TTGTCTAAAT CACTTGTGAA AAAAGCGATT
AAAGCACAAC AAGCAAGGGA AGCTGCACGT AAAGCTCGTG AAGATGCTCG TTCAGGTAAG
AAAAACAAGC GTAAAGACAC TTTGCTATCT GGTAAATTAA CACCTGCACA AAGTAAAAAC
ACTGAAAAAA ATGAATTGTA TTTAGTCGAA GGTGATTCTG CGGGAGGTTC AGCAAAACTT
GGACGAGACC GCAAATTCCA AGCGATATTA CCATTACGTG GTAAGGTAAT TAATACAGAG
AAAGCACGTC TAGAAGATAT TTTTAAAAAT GAAGAAATTA ATACAATTAT CCACACAATC
GGGGCAGGCG TTGGTACTGA CTTTAAAATT GAAGATAGTA ATTATAATCG TGTAATTATT
ATGACTGATG CTGATACTGA TGGTGCGCAT ATTCAAGTGC TATTGTTAAC ATTCTTCTTC
AAATATATGA AACCGCTTGT TCAAGCAGGT CGTGTATTTA TTGCTTTACC TCCACTTTAT
AAATTGGAAA AAGGTAAAGG CAAAACAAAG CGAGTTGAAT ACGCTTGGAC AGACGAAGAG
CTTAATAAAT TGCAAAAAGA ACTTGGTAAA GGCTTCACGT TACAACGTTA CAAAGGTTTG
GGTGAGATGA ACCCTGAACA ATTATGGGAA ACGACGATGA ACCCAGAAAC ACGAACTTTA
ATTCGTGTAC AAGTTGAAGA TGAAGTGCGT TCATCTAAAC GTGTAACAAC ATTAATGGGT
GACAAAGTAC AACCTAGACG TGAATGGATT GAAAAGCATG TTGAGTTTGG TATGCAAGAG
GACCAAAGTA TTTTAGATAA TTCTGAAGTA CAAGTGCTTG AAAATGATCA ATTTGATGAG
GAGGAAATCT AG
|
|---|
| Protein sequence | MNKQNNYSDD SIQVLEGLEA VRKRPGMYIG STDKRGLHHL VYEIVDNSVD EVLNGYGNEI
DVTINKDGSI SIEDNGRGMP TGIHKSGKPT VEVIFTVLHA GGKFGQGGYK TSGGLHGVGA
SVVNALSEWL EVEIHRDGSI YHQSFKNGGS PSSGLVKKGK TKKTGTKVTF KPDDTIFKAS
TSFNFDVLSE RLQESAFLLK NLKITLNDLR SGKERQEHYH YEEGIKEFVS YVNEGKEVLH
DVATFSGEAN GIEVDVAFQY NDQYSESILS FVNNVRTKDG GTHEVGFKTA MTRVFNDYAR
RINELKTKDK NLDGNDIREG LTAVVSVRIP EELLQFEGQT KSKLGTSEAR SAVDSVVADK
LPFYLEEKGQ LSKSLVKKAI KAQQAREAAR KAREDARSGK KNKRKDTLLS GKLTPAQSKN
TEKNELYLVE GDSAGGSAKL GRDRKFQAIL PLRGKVINTE KARLEDIFKN EEINTIIHTI
GAGVGTDFKI EDSNYNRVII MTDADTDGAH IQVLLLTFFF KYMKPLVQAG RVFIALPPLY
KLEKGKGKTK RVEYAWTDEE LNKLQKELGK GFTLQRYKGL GEMNPEQLWE TTMNPETRTL
IRVQVEDEVR SSKRVTTLMG DKVQPRREWI EKHVEFGMQE DQSILDNSEV QVLENDQFDE
EEI
|
|---|
| |