Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_1437 |
Symbol | |
ID | 5315155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 1471150 |
End bp | 1472796 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640779521 |
Product | choline/carnitine/betaine transporter |
Protein accession | YP_001316574 |
Protein GI | 150393899 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1292] Choline-glycine betaine transporter |
TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000110122 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCTT CTTCACCAGA GAATCCAAAT GGAAAGAAGT ATTCACCAGT CTTCATCTAT AGTGCAATTG TTGTTGCTAT AGTCGTATTA CTTGGTGCAT TTTTACCTGA ACAATTCAAC TATGTTACCA ATAATATTAA AATGTGGATT ACAGAAAAGT TAGGTTGGTA TTATCTTATT CTTACTACGA TTATCGTGTT CTTCTGTATA TTCCTTATTT TTAGTCCTAT TGGAAAACTT AAACTAGGTA AACCAAATGA CAAACCTGAG TTTAATACAA TTTCATGGTT TGCTATGTTG TTTAGTGCTG GTATGGGGAT AGGTTTGGTG TTTTATGGTG CAGCTGAACC GATGGCGCAC TTTGCTACGC CACCTACAGC AGATCCCAAA ACTACTGAAG CTTATACTGA AGCTCTACGT TCAACATTTT TCCATTGGGG ATTCCATGCT TGGGCTGTTT ATGGTGTTGT TGCGTTAGCG TTGGCATATT CGCAATTCCG TAAAGGTGAA CCAGGTTTAT TATCTAGAAC TTTACGTCCT CTTTTAGGTG ATAAAGTAGA AGGTCCTATT GGGATTTTTA TTGACGTTTT ATCTGTATTT GCGACAATCG TTGGGGTAGC CGTTTCGTTA GGTATGGGTG CTCTACAAAT TAATGGTGGT TTACATTACT TGTTCAATGT TCCAAACAAT ACGTTTGTAC AAGCGATTAT CATCATTGTT GTTACTATCT TATTTATAGC AAGTGCATGG TCTGGATTAA GTAAAGGTAT TCAATACTTA AGTAACTTGA ACATTGGTTT AGGTACTATT TTAATGGTAG CTGCTTTAAT TGTTGGACCA ACTGTTCTTA TTTTAAATAT GTTAACTAGC TCTACGGGTA GTTTACTAAA CACATTCTTG TTTAATAGTT TTGATACAGC TGCTTTAAAT CCTCAAAAAC GTGAATGGAT GTCTTCATGG ACACTTTATT ACTGGGGTTG GTGGTTAAGT TGGAGCCCAT TCGTTGGAGT GTTTATTGCA CGAGTTTCAA AAGGACGTTC AATTAGAGAG TTCATTTCTG GTGTCTTGCT AGTTCCAGCA ATTGTTAGTT TTGTTTGGTT TAGTGTCTTT GGTGTATTAG GCATCGAGAC AGGTAAGAAA CACAAAGAAA TTTTTGATAT GACTCCTGAA ACACAGCTAT TTGGAGTGTT TAATCATGTG CCATTTGGCA TAGTTTTATC GTTGATTGCA TTATTATTAA TTGCATCATT CTTTATTACA TCTGCTGACT CAGCAACATT TGTATTAGGA ATGCAAACAA CATTTGGTTC ATTAAATCCA TCTAGTATGG TAAAAGTTGT TTGGGGAATT TCACAGGCCT TAATAGCATT TGTACTTTTA TTAGCTGGTG GCGGTAATGG CGCTGAAGCT TTAAATGCGA TTCAAAGTGC TGCAATTATA AGTGCATTCC CATTCTCCTT TGTCGTCATA CTCATGATGG TAAGTTTCTA CAAGGATGCG AACCAGGAAC GTAAATTCCT AGGTTTAACA TTGACTCCGA ATAAACATCG CTTACAAGAA TATATCAAGA GTCAACAAGA AGATTATGAA TCTGACATTC TTGAAAAGCG TCAGTCACGT AGAAATATAG AGAAAAAAGA TAACTAA
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Protein sequence | MNSSSPENPN GKKYSPVFIY SAIVVAIVVL LGAFLPEQFN YVTNNIKMWI TEKLGWYYLI LTTIIVFFCI FLIFSPIGKL KLGKPNDKPE FNTISWFAML FSAGMGIGLV FYGAAEPMAH FATPPTADPK TTEAYTEALR STFFHWGFHA WAVYGVVALA LAYSQFRKGE PGLLSRTLRP LLGDKVEGPI GIFIDVLSVF ATIVGVAVSL GMGALQINGG LHYLFNVPNN TFVQAIIIIV VTILFIASAW SGLSKGIQYL SNLNIGLGTI LMVAALIVGP TVLILNMLTS STGSLLNTFL FNSFDTAALN PQKREWMSSW TLYYWGWWLS WSPFVGVFIA RVSKGRSIRE FISGVLLVPA IVSFVWFSVF GVLGIETGKK HKEIFDMTPE TQLFGVFNHV PFGIVLSLIA LLLIASFFIT SADSATFVLG MQTTFGSLNP SSMVKVVWGI SQALIAFVLL LAGGGNGAEA LNAIQSAAII SAFPFSFVVI LMMVSFYKDA NQERKFLGLT LTPNKHRLQE YIKSQQEDYE SDILEKRQSR RNIEKKDN
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