Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_1426 |
Symbol | |
ID | 5317100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 1460342 |
End bp | 1461205 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640779510 |
Product | SCP-like extracellular protein |
Protein accession | YP_001316563 |
Protein GI | 150393888 |
COG category | [S] Function unknown |
COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000767316 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGATACAC CGAAGAAACA ACAATTTGCC TTTAATAATA TACAAATGAA CATGTCGAAA TCAGATGTTG AGAAAACATT AAATAAACCA AAAAGAGTGA CATTTAATGA ATATGGTACG AAGTGGTATA CGTATTATGA TGACGATTAC AATAATTTTA TAATGATAAG TTACATGAAA GATAAAGTTA ATGCGTTATA TACAAATCAA AATATAATCA CTTCAAAATC AAAAATTAAA TACAATACAC CTAAATCGGT TGTAAGGCAA AGATTAGGCG AACCAGAAAC AGAGATTGTT AAAGGTAGAG TGCGTTACGA ACAAAATAAT AAAGAATATG ATGTTTTCCA TAAAAATCAC ATTTATACGA CGGTATTTTA TGATAAGCAT CGACGTAATA ATGTAACAGC TGTTTTACAA GTAAGTGATG CTATGGAAAA TAGATTAAAA GAACAATATG GAGCACCTTC GAAATCGCTT GCAGATAGTT TTGAACTACA AAATTTTGAT TTAGTTAATG CTGAAAGAAA ACAACATCAA TTATCTACAT TGAAGTATTC TAAACAGAAT TCTGAAACTG CTCGTAAGCA TAGTAAAGAT ATGGCCAAAA ATCATTATTT TGATCATACA AATTTAAAAG GTCAATCACC ATTTGATCGA TTGAAAAAAG ATGGTATTAC ATTTAACTCA GCCGGAGAGA ATTTAGCATA TGGTCAAGTT AGTAGTATCT ATGCACATCA AGGATTAATG AATTCTATTG GTCACAGAAA AAATATTTTA AATGATACGT TTAAAATATT AGGTGTTGGT GTTGATTTTA ATGATGAAAA ACAACCTTTT TGGACAGAAA ATTATACTGG TTAA
|
Protein sequence | MDTPKKQQFA FNNIQMNMSK SDVEKTLNKP KRVTFNEYGT KWYTYYDDDY NNFIMISYMK DKVNALYTNQ NIITSKSKIK YNTPKSVVRQ RLGEPETEIV KGRVRYEQNN KEYDVFHKNH IYTTVFYDKH RRNNVTAVLQ VSDAMENRLK EQYGAPSKSL ADSFELQNFD LVNAERKQHQ LSTLKYSKQN SETARKHSKD MAKNHYFDHT NLKGQSPFDR LKKDGITFNS AGENLAYGQV SSIYAHQGLM NSIGHRKNIL NDTFKILGVG VDFNDEKQPF WTENYTG
|
| |