Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_1360 |
Symbol | |
ID | 5317416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 1390897 |
End bp | 1392993 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640779445 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_001316498 |
Protein GI | 150393823 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCAAG AAAAGAAAGT TTTTAAAACT GAATGGGCAG GAAGATCTTT AACGATTGAA ACAGGGCAAT TAGCTAAACA AGCAAATGGC GCTGTATTGG TTCGTTATGG AGATACAGTC GTGTTATCGA CGGCAACTGC ATCAAAAGAA CCTCGTGATG GAGATTTCTT CCCATTAACA GTGAACTACG AAGAAAAAAT GTACGCTGCG GGTAAAATTC CTGGTGGATT TAAAAAGAGA GAAGGACGTC CTGGTGACGA TGCAACATTA ACTGCGCGAT TAATTGATAG ACCAATTAGA CCTTTATTCC CTAAAGGGTA TAAGCATGAT GTTCAAATTA TGAACATGGT ATTAAGTGCA GATCCTGATT GTTCACCACA AATGGCTGCA ATGATTGGTT CATCTATGGC GCTTAGTGTG TCGGATATTC CATTCCAAGG GCCAATCGCC GGTGTAAATG TGGGTTATAT TGATGGTAAA TATATCATTA ACCCAACAGT AGAAGAAAAA GAAGTTTCTC GTTTAGACCT TGAAGTAGCT GGTCATAAAG ATGCAGTAAA CATGGTAGAG GCAGGCGCTA GTGAGATTAC TGAACAAGAA ATGTTAGAGG CGATTTTCTT TGGTCATGAA GAGATTCAAC GTTTAGTTGA TTTCCAACAA CAAATCGTCG ACCACATTCA ACCTGTTAAA CAAGAATTTA TTCCAGCAGA GCGTGATGAA GCGCTAGTTG AACGTGTGAA ATCTTTAACC GAAGAAAAGG GACTTAAAGA AACAGTTTTA ACATTTGATA AACAACAACG AGATGAAAAT CTTGATAACT TAAAAGAAGA AATCGTCAAT GAATTTATCG ATGAAGAAGA TCCAGAGAAT GAATTACTTA TTAAAGAAGT TTATGCAATT TTAAATGAAT TAGTGAAAGA AGAAGTTCGA CGTTTAATTG CAGATGAAAA AATTAGACCA GACGGCCGTA AACCTGATGA AATCCGTCCA TTAGATTCTG AAGTTGGTAT TTTACCTAGA ACGCATGGTT CAGGTCTATT TACACGTGGT CAGACTCAAG CACTTTCAGT TTTAACATTA GGTGCTTTAG GCGATTATCA ATTAATTGAT GGTTTAGGAC CTGAAGAAGA AAAAAGATTC ATGCATCATT ATAACTTCCC GAACTTTTCA GTAGGTGAAA CTGGTCCAGT ACGTGCGCCA GGTCGTCGTG AAATTGGACA TGGTGCGTTA GGTGAAAGAG CATTAAAATA TATTATTCCT GATACTGCTG ATTTCCCATA TACAATTCGT ATTGTAAGTG AGGTACTTGA ATCAAACGGT TCATCATCTC AAGCGTCAAT TTGTGGATCA ACCTTAGCAT TAATGGATGC GGGCGTACCG ATTAAAGCAC CAGTTGCTGG TATTGCTATG GGCCTTGTTA CACGTGAAGA TAGCTATACG ATTTTAACTG ATATCCAAGG TATGGAAGAT GCATTAGGTG ATATGGACTT TAAAGTCGCT GGTACTAAAG AAGGTATTAC AGCAATCCAA ATGGATATTA AAATTGACGG TTTAACGCGT GAAATTATCG AAGAGGCTCT AGAACAAGCG AGACGTGGTC GTTTAGAAAT AATGAATCAT ATGTTACAAA CAATTGATCA ACCACGTACT GAATTAAGTG CTTACGCGCC AAAAGTTGTA ACTATGACAA TTAAACCAGA TAAGATTAGA GATGTTATCG GACCTGGTGG TAAAAAAATT AACGAAATTA TTGATGAAAC AGGCGTTAAA TTAGATATTG AACAAGATGG TACTATCTTT ATTGGGGCCG TTGATCAAGC TATGATAAAT CGTGCTCGTG AAATCATTGA GGAAATTACA CGTGAAGCGG AAGTAGGTCA AACTTATCAA GCCACTGTTA AACGTATTGA AAAATACGGT GCGTTTGTAG GCCTATTCCC GGGTAAAGAT GCGTTGCTTC ACATTTCACA AATTTCAAAA AATAGAATTG AAAAAGTGGA AGATGTTTTA AAAATCGGTG ACACAATTGA AGTTAAGATT ACTGAAATTG ATAAACAAGG TCGAGTAAAT GCATCACACA GAGCATTAGA AGAATAA
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Protein sequence | MSQEKKVFKT EWAGRSLTIE TGQLAKQANG AVLVRYGDTV VLSTATASKE PRDGDFFPLT VNYEEKMYAA GKIPGGFKKR EGRPGDDATL TARLIDRPIR PLFPKGYKHD VQIMNMVLSA DPDCSPQMAA MIGSSMALSV SDIPFQGPIA GVNVGYIDGK YIINPTVEEK EVSRLDLEVA GHKDAVNMVE AGASEITEQE MLEAIFFGHE EIQRLVDFQQ QIVDHIQPVK QEFIPAERDE ALVERVKSLT EEKGLKETVL TFDKQQRDEN LDNLKEEIVN EFIDEEDPEN ELLIKEVYAI LNELVKEEVR RLIADEKIRP DGRKPDEIRP LDSEVGILPR THGSGLFTRG QTQALSVLTL GALGDYQLID GLGPEEEKRF MHHYNFPNFS VGETGPVRAP GRREIGHGAL GERALKYIIP DTADFPYTIR IVSEVLESNG SSSQASICGS TLALMDAGVP IKAPVAGIAM GLVTREDSYT ILTDIQGMED ALGDMDFKVA GTKEGITAIQ MDIKIDGLTR EIIEEALEQA RRGRLEIMNH MLQTIDQPRT ELSAYAPKVV TMTIKPDKIR DVIGPGGKKI NEIIDETGVK LDIEQDGTIF IGAVDQAMIN RAREIIEEIT REAEVGQTYQ ATVKRIEKYG AFVGLFPGKD ALLHISQISK NRIEKVEDVL KIGDTIEVKI TEIDKQGRVN ASHRALEE
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