Gene SaurJH1_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH1_1360 
Symbol 
ID5317416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH1 
KingdomBacteria 
Replicon accessionNC_009632 
Strand
Start bp1390897 
End bp1392993 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content37% 
IMG OID640779445 
Productpolynucleotide phosphorylase/polyadenylase 
Protein accessionYP_001316498 
Protein GI150393823 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) 
TIGRFAM ID[TIGR03591] polyribonucleotide nucleotidyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCAAG AAAAGAAAGT TTTTAAAACT GAATGGGCAG GAAGATCTTT AACGATTGAA 
ACAGGGCAAT TAGCTAAACA AGCAAATGGC GCTGTATTGG TTCGTTATGG AGATACAGTC
GTGTTATCGA CGGCAACTGC ATCAAAAGAA CCTCGTGATG GAGATTTCTT CCCATTAACA
GTGAACTACG AAGAAAAAAT GTACGCTGCG GGTAAAATTC CTGGTGGATT TAAAAAGAGA
GAAGGACGTC CTGGTGACGA TGCAACATTA ACTGCGCGAT TAATTGATAG ACCAATTAGA
CCTTTATTCC CTAAAGGGTA TAAGCATGAT GTTCAAATTA TGAACATGGT ATTAAGTGCA
GATCCTGATT GTTCACCACA AATGGCTGCA ATGATTGGTT CATCTATGGC GCTTAGTGTG
TCGGATATTC CATTCCAAGG GCCAATCGCC GGTGTAAATG TGGGTTATAT TGATGGTAAA
TATATCATTA ACCCAACAGT AGAAGAAAAA GAAGTTTCTC GTTTAGACCT TGAAGTAGCT
GGTCATAAAG ATGCAGTAAA CATGGTAGAG GCAGGCGCTA GTGAGATTAC TGAACAAGAA
ATGTTAGAGG CGATTTTCTT TGGTCATGAA GAGATTCAAC GTTTAGTTGA TTTCCAACAA
CAAATCGTCG ACCACATTCA ACCTGTTAAA CAAGAATTTA TTCCAGCAGA GCGTGATGAA
GCGCTAGTTG AACGTGTGAA ATCTTTAACC GAAGAAAAGG GACTTAAAGA AACAGTTTTA
ACATTTGATA AACAACAACG AGATGAAAAT CTTGATAACT TAAAAGAAGA AATCGTCAAT
GAATTTATCG ATGAAGAAGA TCCAGAGAAT GAATTACTTA TTAAAGAAGT TTATGCAATT
TTAAATGAAT TAGTGAAAGA AGAAGTTCGA CGTTTAATTG CAGATGAAAA AATTAGACCA
GACGGCCGTA AACCTGATGA AATCCGTCCA TTAGATTCTG AAGTTGGTAT TTTACCTAGA
ACGCATGGTT CAGGTCTATT TACACGTGGT CAGACTCAAG CACTTTCAGT TTTAACATTA
GGTGCTTTAG GCGATTATCA ATTAATTGAT GGTTTAGGAC CTGAAGAAGA AAAAAGATTC
ATGCATCATT ATAACTTCCC GAACTTTTCA GTAGGTGAAA CTGGTCCAGT ACGTGCGCCA
GGTCGTCGTG AAATTGGACA TGGTGCGTTA GGTGAAAGAG CATTAAAATA TATTATTCCT
GATACTGCTG ATTTCCCATA TACAATTCGT ATTGTAAGTG AGGTACTTGA ATCAAACGGT
TCATCATCTC AAGCGTCAAT TTGTGGATCA ACCTTAGCAT TAATGGATGC GGGCGTACCG
ATTAAAGCAC CAGTTGCTGG TATTGCTATG GGCCTTGTTA CACGTGAAGA TAGCTATACG
ATTTTAACTG ATATCCAAGG TATGGAAGAT GCATTAGGTG ATATGGACTT TAAAGTCGCT
GGTACTAAAG AAGGTATTAC AGCAATCCAA ATGGATATTA AAATTGACGG TTTAACGCGT
GAAATTATCG AAGAGGCTCT AGAACAAGCG AGACGTGGTC GTTTAGAAAT AATGAATCAT
ATGTTACAAA CAATTGATCA ACCACGTACT GAATTAAGTG CTTACGCGCC AAAAGTTGTA
ACTATGACAA TTAAACCAGA TAAGATTAGA GATGTTATCG GACCTGGTGG TAAAAAAATT
AACGAAATTA TTGATGAAAC AGGCGTTAAA TTAGATATTG AACAAGATGG TACTATCTTT
ATTGGGGCCG TTGATCAAGC TATGATAAAT CGTGCTCGTG AAATCATTGA GGAAATTACA
CGTGAAGCGG AAGTAGGTCA AACTTATCAA GCCACTGTTA AACGTATTGA AAAATACGGT
GCGTTTGTAG GCCTATTCCC GGGTAAAGAT GCGTTGCTTC ACATTTCACA AATTTCAAAA
AATAGAATTG AAAAAGTGGA AGATGTTTTA AAAATCGGTG ACACAATTGA AGTTAAGATT
ACTGAAATTG ATAAACAAGG TCGAGTAAAT GCATCACACA GAGCATTAGA AGAATAA
 
Protein sequence
MSQEKKVFKT EWAGRSLTIE TGQLAKQANG AVLVRYGDTV VLSTATASKE PRDGDFFPLT 
VNYEEKMYAA GKIPGGFKKR EGRPGDDATL TARLIDRPIR PLFPKGYKHD VQIMNMVLSA
DPDCSPQMAA MIGSSMALSV SDIPFQGPIA GVNVGYIDGK YIINPTVEEK EVSRLDLEVA
GHKDAVNMVE AGASEITEQE MLEAIFFGHE EIQRLVDFQQ QIVDHIQPVK QEFIPAERDE
ALVERVKSLT EEKGLKETVL TFDKQQRDEN LDNLKEEIVN EFIDEEDPEN ELLIKEVYAI
LNELVKEEVR RLIADEKIRP DGRKPDEIRP LDSEVGILPR THGSGLFTRG QTQALSVLTL
GALGDYQLID GLGPEEEKRF MHHYNFPNFS VGETGPVRAP GRREIGHGAL GERALKYIIP
DTADFPYTIR IVSEVLESNG SSSQASICGS TLALMDAGVP IKAPVAGIAM GLVTREDSYT
ILTDIQGMED ALGDMDFKVA GTKEGITAIQ MDIKIDGLTR EIIEEALEQA RRGRLEIMNH
MLQTIDQPRT ELSAYAPKVV TMTIKPDKIR DVIGPGGKKI NEIIDETGVK LDIEQDGTIF
IGAVDQAMIN RAREIIEEIT REAEVGQTYQ ATVKRIEKYG AFVGLFPGKD ALLHISQISK
NRIEKVEDVL KIGDTIEVKI TEIDKQGRVN ASHRALEE