Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_1350 |
Symbol | polC |
ID | 5315475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 1378326 |
End bp | 1382642 |
Gene Length | 4317 bp |
Protein Length | 1438 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640779435 |
Product | DNA polymerase III PolC |
Protein accession | YP_001316488 |
Protein GI | 150393813 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01405] DNA polymerase III, alpha chain, Gram-positive type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCAATGA CAGAGCAACA AAAATTTAAA GTGCTTGCTG ATCAAATTAA AATTTCAAAT CAATTAGATG CTGAAATTTT AAATTCAGGT GAACTGACAC GTATAGATGT TTCTAACAAA AACAGAACAT GGGAATTTCA TATTACATTA CCACAATTCT TAGCTCATGA AGATTATTTA TTATTTATAA ATGCAATAGA GCAAGAGTTT AAAGATATCG CCAACGTTAC ATGTCGTTTT ACGGTAACAA ATGGCACGAA TCAAGATGAA CATGCAATTA AATACTTTGG GCACTGTATT GACCAAACAG CTTTATCTCC AAAAGTTAAA GGTCAATTGA AACAGAAAAA GCTTATTATG TCTGGAAAAG TATTAAAAGT AATGGTATCA AATGACATTG AACGTAATCA TTTTGATAAG GCATGTAATG GAAGTCTTAT CAAAGCGTTT AGAAATTGTG GTTTTGATAT CGATAAAATC ATATTCGAAA CAAATGATAA TGATCAAGAA CAAAACTTAG CTTCTTTAGA AGCACATATT CAAGAAGAAG ACGAACAAAG TGCACGATTG GCAACAGAGA AACTTGAAAA AATGAAAGCT GAAAAAGCGA AACAACAAGA TAACAACGAA AGTGCTGTCG ATAAGTGTCA AATTGGTAAG CCGATTCAAA TTGAAAATAT TAAACCAATT GAATCTATTA TTGAGGAAGA GTTTAAAGTT GCAATAGAGG GTGTCATTTT TGATATAAAC TTAAAAGAAC TTAAAAGTGG TCGTCATATC GTAGAAATTA AAGTGACTGA CTATACGGAC TCATTAGTTT TAAAAATGTT TACTCGTAAA AACAAAGATG ATTTAGAACA TTTTAAAGCG CTAAGTGTAG GTAAATGGGT TAGGGCTCAA GGTCGTATTG AAGAAGATAC ATTTATTAGA GATTTAGTTA TGATGATGTC TGATATTGAA GAGATTAAAA AAGCGACAAA AAAAGATAAG GCTGAAGAAA AGCGTGTAGA ATTCCACTTG CATACTGCAA TGAGCCAAAT GGATGGTATA CCCAATATTG GTGCGTATGT TAAACAGGCA GCAGACTGGG GACATCCAGC CATTGCGGTT ACAGACCATA ATGTTGTGCA AGCATTTCCA GATGCTCACG CAGCAGCGGA AAAACATGGC ATTAAAATGA TATACGGTAT GGAAGGTATG TTAGTTGATG ATGGTGTTCC GATTGCATAC AAACCACAAG ATGTCGTATT AAAAGATGCT ACTTATGTTG TGTTCGACGT TGAGACAACT GGTTTATCAA ATCAGTATGA TAAAATCATC GAGCTTGCAG CTGTGAAAGT TCATAACGGT GAAATCATCG ATAAGTTTGA AAGGTTTAGT AATCCGCATG AACGATTATC GGAAACGATT ATCAATTTGA CGCATATTAC TGATGATATG TTAGTAGATG CCCCTGAGAT TGAAGAAGTA CTTACAGAGT TTAAAGAATG GGTTGGCGAT GCGATATTCG TAGCGCATAA TGCTTCGTTT GATATGGGCT TTATCGATAC GGGATATGAA CGTCTTGGGT TTGGACCATC AACGAATGGT GTTATCGATA CTTTAGAATT ATCTCGTACG ATTAATACTG AATATGGTAA ACATGGTTTG AATTTCTTAG CTAAAAAATA TGGCGTAGAA TTAACGCAAC ATCACCGTGC CATTTATGAT ACAGAAGCAA CAGCTTACAT TTTCATAAAA ATGGTTCAAC AAATGAAAGA ATTAGGTGTA TTAAATCATA ACGAAATCAA CAAAAAACTC AGTAATGAAG ATGCATATAA ACGTGCAAGA CCTAGCCATG TCACATTAAT TGTACAAAAC CAACAAGGTC TTAAAAATCT ATTTAAAATT GTAAGTGCAT CATTGGTGAA GTATTTCTAC CGTACACCTC GAATTCCACG TTCATTGTTA GATGAATATC GTGAGGGATT ATTGGTAGGT ACAGCGTGTG ATGAAGGTGA ATTATTTACG GCAGTTATGC AGAAGGACCA GAGCCAAGTT GAAAAAATTG CCAAATATTA TGATTTTATT GAAATTCAAC CACCGGCACT TTATCAAGAT TTAATTGATA GAGAGCTTAT TAGAGATACT GAAACATTAC ATGAAATTTA TCAACGTTTA ATACATGCAG GTGACACAGC GGGTATACCT GTTATTGCGA CAGGAAATGC ACACTATTTG TTTGAACATG ATGGTATCGC ACGTAAAATT TTAATAGCAT CACAACCCGG CAATCCACTT AATCGCTCAA CTTTACCGGA AGCACATTTT AGAACTACAG ATGAAATGTT AAACGAGTTT CATTTTTTAG GTGAAGAAAA AGCGCATGAA ATTGTTGTGA AAAATACAAA CGAATTAGCA GATCGAATTG AACGTGTTGT TCCTATTAAA GATGAATTAT ACACACCGCG TATGGAAGGT GCTAACGAAG AAATTAGAGA ACTAAGTTAT ACAAATGCGC GTAAACTGTA TGGTGAAGAC CTGCCTCAAA TCGTAATTGA TCGATTAGAA AAAGAATTAA AAAGTATTAT CGGTAATGGA TTTGCGGTAA TTTACTTAAT TTCGCAACGT TTAGTTAAAA AATCATTAGA TGATGGATAC TTAGTTGGTT CCCGTGGTTC AGTAGGTTCT AGTTTTGTAG CGACAATGAC TGAGATTACT GAAGTAAACC CGTTACCGCC ACACTATATT TGTCCGAACT GTAAAACGAG TGAATTTTTC AATGATGGTT CAGTAGGATC AGGATTCGAT TTACCTGATA AGACGTGTGA AACTTGTGGA GCGCCACTTA TTAAAGAAGG ACAAGATATT CCGTTTGAAA CATTTTTAGG ATTTAAGGGA GATAAAGTTC CTGATATCGA CTTAAACTTT AGTGGTGAAT ATCAACCGAA TGCCCATAAC TACACAAAAG TATTATTTGG TGAGGATAAA GTATTCCGTG CAGGTACAAT TGGTACCGTT GCTGAAAAGA CTGCTTTTGG TTATGTTAAA GGTTATTTGA ATGATCAAGG CATCCACAAA AGAGGCGCTG AAATAGATCG ACTCGTTAAA GGATGTACAG GTGTTAAACG TACAACTGGA CAGCATCCAG GAGGTATTAT TGTAGTACCT GATTACATGG ATATTTATGA TTTTACGCCG ATACAATATC CTGCCGATGA TCAAAATTCA GCATGGATGA CGACACATTT TGATTTCCAT TCTATTCATG ATAATGTATT AAAACTTGAT ATACTTGGAC ACGATGATCC AACAATGATT CGTATGCTTC AAGATTTATC GGGCATTGAT CCAAAAACGA TACCTGTAGA TGACAAAGAA GTCATGCAAA TATTTAGTAC ACCTGAAAGT TTAGGTGTTA CTGAAGATGA AATTTTATGT AAAACAGGTA CGTTTGGGGT TCCAGAATTC GGTACAGGGT TCGTGCGTCA AATGTTAGAA GATACAAAGC CAACAACATT TTCTGAATTA GTTCAAATCT CAGGATTATC TCATGGTACA GATGTGTGGT TAGGCAATGC TCAAGAATTA ATTAAAACCG GTATATGTGA TTTATCAAGT GTAATTGGTT GTCGTGATGA TATCATGGTT TATTTAATGT ATGCTGGTTT AGAACCATCA ATGGCTTTTA AAATAATGGA GTCAGTACGT AAAGGTAAAG GTTTAACTGA AGAAATGATT GAAACGATGA AAGAAAATGA AGTGCCGGAT TGGTATTTAG ATTCATGTCT TAAAATTAAG TACATGTTCC CTAAAGCCCA TGCAGCAGCA TACGTTTTAA TGGCAGTACG TATCGCATAT TTCAAAGTAC ATCATCCACT TTATTACTAT GCATCTTACT TTACAATTCG TGCGTCAGAT TTTGATTTAA TCACGATGAT TAAAGATAAA ACAAGCATTC GAAATACTGT AAAAGACATG TATTCTCGCT ATATGGATCT AGGTAAAAAA GAAAAAGACG TATTAACAGT CTTGGAAATT ATGAATGAAA TGGCGCATCG AGGTTATCGA ATGCAACCGA TTAGTTTAGA AAAGAGTCAG GCGTTCGAAT TTATCATTGA AGGCGATACA CTTATTCCGC CGTTCATATC AGTGCCTGGG CTTGGCGAAA ACGTTGCGAA ACGAATTGTT GAAGCTCGTG ACGATGGCCC ATTTTTATCA AAAGAAGATT TAAACAAAAA AGCTGGATTA TCTCAGAAAA TTATTGAGTA TTTAGATGAG TTAGGCTCAT TACCGAATTT ACCAGATAAA GCTCAACTTT CGATATTTGA TATGTAA
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Protein sequence | MAMTEQQKFK VLADQIKISN QLDAEILNSG ELTRIDVSNK NRTWEFHITL PQFLAHEDYL LFINAIEQEF KDIANVTCRF TVTNGTNQDE HAIKYFGHCI DQTALSPKVK GQLKQKKLIM SGKVLKVMVS NDIERNHFDK ACNGSLIKAF RNCGFDIDKI IFETNDNDQE QNLASLEAHI QEEDEQSARL ATEKLEKMKA EKAKQQDNNE SAVDKCQIGK PIQIENIKPI ESIIEEEFKV AIEGVIFDIN LKELKSGRHI VEIKVTDYTD SLVLKMFTRK NKDDLEHFKA LSVGKWVRAQ GRIEEDTFIR DLVMMMSDIE EIKKATKKDK AEEKRVEFHL HTAMSQMDGI PNIGAYVKQA ADWGHPAIAV TDHNVVQAFP DAHAAAEKHG IKMIYGMEGM LVDDGVPIAY KPQDVVLKDA TYVVFDVETT GLSNQYDKII ELAAVKVHNG EIIDKFERFS NPHERLSETI INLTHITDDM LVDAPEIEEV LTEFKEWVGD AIFVAHNASF DMGFIDTGYE RLGFGPSTNG VIDTLELSRT INTEYGKHGL NFLAKKYGVE LTQHHRAIYD TEATAYIFIK MVQQMKELGV LNHNEINKKL SNEDAYKRAR PSHVTLIVQN QQGLKNLFKI VSASLVKYFY RTPRIPRSLL DEYREGLLVG TACDEGELFT AVMQKDQSQV EKIAKYYDFI EIQPPALYQD LIDRELIRDT ETLHEIYQRL IHAGDTAGIP VIATGNAHYL FEHDGIARKI LIASQPGNPL NRSTLPEAHF RTTDEMLNEF HFLGEEKAHE IVVKNTNELA DRIERVVPIK DELYTPRMEG ANEEIRELSY TNARKLYGED LPQIVIDRLE KELKSIIGNG FAVIYLISQR LVKKSLDDGY LVGSRGSVGS SFVATMTEIT EVNPLPPHYI CPNCKTSEFF NDGSVGSGFD LPDKTCETCG APLIKEGQDI PFETFLGFKG DKVPDIDLNF SGEYQPNAHN YTKVLFGEDK VFRAGTIGTV AEKTAFGYVK GYLNDQGIHK RGAEIDRLVK GCTGVKRTTG QHPGGIIVVP DYMDIYDFTP IQYPADDQNS AWMTTHFDFH SIHDNVLKLD ILGHDDPTMI RMLQDLSGID PKTIPVDDKE VMQIFSTPES LGVTEDEILC KTGTFGVPEF GTGFVRQMLE DTKPTTFSEL VQISGLSHGT DVWLGNAQEL IKTGICDLSS VIGCRDDIMV YLMYAGLEPS MAFKIMESVR KGKGLTEEMI ETMKENEVPD WYLDSCLKIK YMFPKAHAAA YVLMAVRIAY FKVHHPLYYY ASYFTIRASD FDLITMIKDK TSIRNTVKDM YSRYMDLGKK EKDVLTVLEI MNEMAHRGYR MQPISLEKSQ AFEFIIEGDT LIPPFISVPG LGENVAKRIV EARDDGPFLS KEDLNKKAGL SQKIIEYLDE LGSLPNLPDK AQLSIFDM
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