Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_1306 |
Symbol | |
ID | 5316678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 1329934 |
End bp | 1330578 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640779393 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_001316446 |
Protein GI | 150393771 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0153242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAC TATATCCATC ATTATTATCT GTTGATTTTT TGGATTTACA ACATGAATTA AAGCGACTTG AAGAAGCAGG TGTCGACGGA GTTCATTTTG ATGTTATGGA TGGTCAATTT GTGCCTAATA TATCTATTGG TTTACCAATA TTAGATGCAG TAAGAAAAGG CACAACATTA CCTATAGACG TACATTTGAT GATTGAAAAT CCAGAAAAGT ATATTGCATC ATTTGCAGAA CATGGTGCCG ATATGATTTC AATTCATGTC GAATCAACGC CTCATATTCA TCGTGCTATT CAAATGATTA AACATTTAGA TAAAAAAGCT GGTGTAGTAA TTAATCCTGG TACACCAATA TCACAAATTG AACCTATTTT AGACATTGTT GATTATGTAT TAGTGATGAC AGTTAACCCA GGGTTTGGTG GTCAATCATT TATTGATCAA TGCGTAGAAA AAATAGCGGG TCTTAATGCT ATTAAAATGG AACGTCAATT AAACTTTGAT ATTGAAGTTG ATGGAGGCGT AAATACCGAT ACAGCGAAAG TTTGTGTTGA AAATGGTGCT ACAATGCTAG TAACAGGTTC ATTTTTCTTT AAACAAGAAG ATTATAAAAA AGTCACACAA GCATTGAAAG GTTGA
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Protein sequence | MTKLYPSLLS VDFLDLQHEL KRLEEAGVDG VHFDVMDGQF VPNISIGLPI LDAVRKGTTL PIDVHLMIEN PEKYIASFAE HGADMISIHV ESTPHIHRAI QMIKHLDKKA GVVINPGTPI SQIEPILDIV DYVLVMTVNP GFGGQSFIDQ CVEKIAGLNA IKMERQLNFD IEVDGGVNTD TAKVCVENGA TMLVTGSFFF KQEDYKKVTQ ALKG
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