| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_1296 |
|---|
| Symbol | |
|---|
| ID | 5315975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | + |
|---|
| Start bp | 1317740 |
|---|
| End bp | 1320148 |
|---|
| Gene Length | 2409 bp |
|---|
| Protein Length | 802 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640779383 |
|---|
| Product | primosomal protein N' |
|---|
| Protein accession | YP_001316436 |
|---|
| Protein GI | 150393761 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
|---|
| TIGRFAM ID | [TIGR00595] primosomal protein N' |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGCGA AAGTCATAGT CGATGTCGCG TCGAAGAGCG TTGACTATAA ATTTGATTAT
ATAATTCCCG AACAACTCGA ATCTGTCATC CAACCTGGTG TGCGTGTAAT TGTACCTTTT
GGACCAAGAA CGATTCAAGG TTATGTAATG GAAGTAACAG CAGAACCTGA TGCACAACTT
GACGTTTCGA AGTTAAAAAA AATCATAGAA GTGAAAGATA TACAACCAGA ATTAACATCA
GAATTAATAG CTTTAAGTGA GTGGATGGGT TCAACTCATG TCATTAAACG TATTTCTATG
CTAGAAGTGA TGCTTCCAAG TGCTATTAAA GCGAAGTATA AAAAAGCATT TAAGATGAAA
GATGACATAG AGCTACCTTC AGCTTTATTA CAAAAATTTG ATAAGCATGG TTACTATTAT
TATAAAGATG CGCAAAAAAA TAATGATATT CAATTGCTTA TGAAGTTGTT AAAAGATGAT
ATCGTTGAAG AAAAAACGAT TCTCACACAA AATATAACTA AAAAAACCAA GCGTGCTGTT
CGTGTCATTG AAGGGTATCA TCCTGATGAA GTATTAGCTA AGTTGGAGAA AGTTATTAAA
CAATACGATT TGTATGCTTA CTTGTCTGAA GAACAACATA AAACAATATT TTTAACTGAT
ATTGAGGATA TGGGCTTTTC AAAATCCAGT TTAGATGGAC TTATCAAAAA AGGTTATGTT
GAAAAATATG ACGCGGTTGT TGAAAGAGAC CCATTTAAAG ATCGTGTTTT CGAACAAGAA
TCAAAACAGC AATTAACAGA AGACCAATAT AAAGCATATG AAGCGATTAA AGCTAAAATT
GTAAGCCAAG AGCAAGAAAC ATTTTTACTT CATGGTGTGA CGGGATCAGG TAAAACAGAA
GTATATTTAC AAACGATAGA AGATGTTTTA AGCCAAGGAA AACAGGCGAT GATGTTAGTT
CCTGAAATCG CTCTAACACC GCAAATGGTT TTACGCTTCA AACGTCGATT TGGTGATGAC
GTTGCTGTAT TACATTCTGG CTTATCTAAT GGGGAACGTT ATGATGAGTG GCAAAAAATT
AGGGATGATC GTGCGAGAGT AAGTGTTGGT GCAAGGTCAA GTGTGTTCGC ACCTTTCAAA
AATTTAGGGT TAATCATCAT TGATGAAGAA CATGAATCTA CATATAAACA AGAAGATTAT
CCGAGATATC ACGCTAGAGA AATTGCCCAA TGGCGAAGTG AATATCATCA CTGTCCAGTC
ATTTTAGGAA GTGCAACACC ATGTCTTGAA AGTTATGCAC GAGCTGAAAA AGACGTTTAT
CATTTGCTAT CATTACCAAA CAGAGTGAAC CAACAAGCTT TACCTGAAAT TGATATAGTA
GACATGCGTG AAGAATTGAG TGAAGGTAAT CGGTCAATGT TTTCAAAAGA TTTACGTGAA
GCCATACAAT TAAGATTAGA TCGACAGGAA CAAGTTGTTT TATTTTTAAA TCGACGTGGT
TATGCATCGT TTATGTTATG TCGGGATTGT GGATATGTAC CGCAATGTCC AAACTGTGAT
ATTTCATTAA CGTATCATAA AACGACAGAC TTATTAAAAT GTCACTATTG TGGTTACCAA
GAGACGCCAC CGAATCAATG TCCAAATTGT GAGAGTGAAC ACATTCGACA AGTAGGTACT
GGTACTCAGA AAGTTGAAGA ACTATTGCAA CAAGAATTTG AAGATGCGCG CATAATTAGG
ATGGATGTAG ATACAACCTC AAAGAAAGGT GCACATGAAA AGTTATTGAC TGAATTCGAA
AAAGGTAACG GTGACATTTT ACTAGGTACT CAGATGATTG CGAAAGGATT AGATTATCCA
AATATTACTT TAGTTGGTGT GCTGAATGCA GATACAATGT TAAATTTACC TGATTTTCGG
GCGAGCGAAC GTACTTATCA ACTATTAACG CAAGTGGCTG GTAGAGCTGG TCGTCATGAA
AAGGCAGGTC AAGTCATCAT TCAAACGTAT AATCCAGATC ATTATTCAAT ATTGGATGTT
CAAAAAAATG ATTATTTAAC ATTTTATCGT CAGGAAATGG AATATCGTAA ATTAGGAAAG
TATCCACCGT ATTATTATTT GATTAATTTC ACAATCTCAC ATAAAGAAAT GAAGAAGGTT
ATGGAAGCAT CGCAGCATGT TCATAAAATT TTATTACAGC ATTTAACAGA AAAAGCGCTT
GTACTAGGTC CATCTCCGGC AGCACTTGCG AGAATCAACA ATGAATTTAG ATTCCAAATT
TTAGTGAAAT ATAAAAGTGA ACCTGGATTA TTACAAGCCA TTCAGTTTTT AGATGACTAT
TACCATGAAA AATTTATAAA AGAAAAATTA GCATTGAAGA TTGATATTGA TCCACAGATG
ATGATGTAA
|
|---|
| Protein sequence | MIAKVIVDVA SKSVDYKFDY IIPEQLESVI QPGVRVIVPF GPRTIQGYVM EVTAEPDAQL
DVSKLKKIIE VKDIQPELTS ELIALSEWMG STHVIKRISM LEVMLPSAIK AKYKKAFKMK
DDIELPSALL QKFDKHGYYY YKDAQKNNDI QLLMKLLKDD IVEEKTILTQ NITKKTKRAV
RVIEGYHPDE VLAKLEKVIK QYDLYAYLSE EQHKTIFLTD IEDMGFSKSS LDGLIKKGYV
EKYDAVVERD PFKDRVFEQE SKQQLTEDQY KAYEAIKAKI VSQEQETFLL HGVTGSGKTE
VYLQTIEDVL SQGKQAMMLV PEIALTPQMV LRFKRRFGDD VAVLHSGLSN GERYDEWQKI
RDDRARVSVG ARSSVFAPFK NLGLIIIDEE HESTYKQEDY PRYHAREIAQ WRSEYHHCPV
ILGSATPCLE SYARAEKDVY HLLSLPNRVN QQALPEIDIV DMREELSEGN RSMFSKDLRE
AIQLRLDRQE QVVLFLNRRG YASFMLCRDC GYVPQCPNCD ISLTYHKTTD LLKCHYCGYQ
ETPPNQCPNC ESEHIRQVGT GTQKVEELLQ QEFEDARIIR MDVDTTSKKG AHEKLLTEFE
KGNGDILLGT QMIAKGLDYP NITLVGVLNA DTMLNLPDFR ASERTYQLLT QVAGRAGRHE
KAGQVIIQTY NPDHYSILDV QKNDYLTFYR QEMEYRKLGK YPPYYYLINF TISHKEMKKV
MEASQHVHKI LLQHLTEKAL VLGPSPAALA RINNEFRFQI LVKYKSEPGL LQAIQFLDDY
YHEKFIKEKL ALKIDIDPQM MM
|
|---|
| |