| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_1281 |
|---|
| Symbol | |
|---|
| ID | 5315696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | + |
|---|
| Start bp | 1300918 |
|---|
| End bp | 1301835 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640779368 |
|---|
| Product | RluA family pseudouridine synthase |
|---|
| Protein accession | YP_001316421 |
|---|
| Protein GI | 150393746 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.71357 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACTT ATGAATTTAA CATTACAGAT AAAGAACAAA CAGGTATGCG TGTAGATAAG
TTGCTGCCTG AATTAAATAA TGATTGGTCT CGTAACCAGA TACAAGATTG GATTAAAGCA
GGTTTAGTCG TTGCAAACGA TAAAGTTGTT AAATCTAATT ATAAAGTGAA ACTTAATGAT
CATATAGTTG TCACTGAAAA AGAAGTGGTT GAAGCTGATA TTCTACCTGA AAATTTAAAT
TTAGATATTT ATTATGAAGA TGACGATGTT GCAGTTGTAT ATAAACCGAA AGGCATGGTA
GTTCATCCAT CACCAGGGCA TTATACCAAT ACATTAGTTA ATGGTTTAAT GTATCAAATT
AAAAATTTGT CAGGTATTAA TGGAGAAATT CGTCCAGGTA TTGTTCACCG TATAGATATG
GATACTTCTG GTTTATTAAT GGTTGCTAAA AATGATATTG CTCATCGTGG GCTTGTAGAA
CAATTAATGG ATAAATCTGT TAAAAGAAAA TATATCGCTT TAGTTCACGG GAATATTCCT
CATGATTACG GTACAATCGA TGCGCCAATT GGTAGAAACA AAAATGATCG TCAATCTATG
GCTGTTGTTG ATGATGGTAA GGAAGCAGTG ACACATTTTA ACGTACTAGA ACATTTTAAA
GATTATACGC TTGTTGAATG TCAACTTGAA ACAGGACGTA CGCATCAAAT CCGTGTGCAC
ATGAAATATA TTGGCTTCCC ATTAGTTGGT GATCCAAAGT ATGGACCGAA AAAGACATTG
GATATTGGTG GTCAAGCTCT ACATGCTGGA CTTATTGGAT TCGAACATCC AGTAACAGGT
GAATATATTG AAAGACATGC TGAATTACCA CAAGACTTTG AAGATTTATT AGATACAATT
CGAAAAAGAG ATGCATAA
|
|---|
| Protein sequence | METYEFNITD KEQTGMRVDK LLPELNNDWS RNQIQDWIKA GLVVANDKVV KSNYKVKLND
HIVVTEKEVV EADILPENLN LDIYYEDDDV AVVYKPKGMV VHPSPGHYTN TLVNGLMYQI
KNLSGINGEI RPGIVHRIDM DTSGLLMVAK NDIAHRGLVE QLMDKSVKRK YIALVHGNIP
HDYGTIDAPI GRNKNDRQSM AVVDDGKEAV THFNVLEHFK DYTLVECQLE TGRTHQIRVH
MKYIGFPLVG DPKYGPKKTL DIGGQALHAG LIGFEHPVTG EYIERHAELP QDFEDLLDTI
RKRDA
|
|---|
| |