Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_1281 |
Symbol | |
ID | 5315696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 1300918 |
End bp | 1301835 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640779368 |
Product | RluA family pseudouridine synthase |
Protein accession | YP_001316421 |
Protein GI | 150393746 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.71357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGACTT ATGAATTTAA CATTACAGAT AAAGAACAAA CAGGTATGCG TGTAGATAAG TTGCTGCCTG AATTAAATAA TGATTGGTCT CGTAACCAGA TACAAGATTG GATTAAAGCA GGTTTAGTCG TTGCAAACGA TAAAGTTGTT AAATCTAATT ATAAAGTGAA ACTTAATGAT CATATAGTTG TCACTGAAAA AGAAGTGGTT GAAGCTGATA TTCTACCTGA AAATTTAAAT TTAGATATTT ATTATGAAGA TGACGATGTT GCAGTTGTAT ATAAACCGAA AGGCATGGTA GTTCATCCAT CACCAGGGCA TTATACCAAT ACATTAGTTA ATGGTTTAAT GTATCAAATT AAAAATTTGT CAGGTATTAA TGGAGAAATT CGTCCAGGTA TTGTTCACCG TATAGATATG GATACTTCTG GTTTATTAAT GGTTGCTAAA AATGATATTG CTCATCGTGG GCTTGTAGAA CAATTAATGG ATAAATCTGT TAAAAGAAAA TATATCGCTT TAGTTCACGG GAATATTCCT CATGATTACG GTACAATCGA TGCGCCAATT GGTAGAAACA AAAATGATCG TCAATCTATG GCTGTTGTTG ATGATGGTAA GGAAGCAGTG ACACATTTTA ACGTACTAGA ACATTTTAAA GATTATACGC TTGTTGAATG TCAACTTGAA ACAGGACGTA CGCATCAAAT CCGTGTGCAC ATGAAATATA TTGGCTTCCC ATTAGTTGGT GATCCAAAGT ATGGACCGAA AAAGACATTG GATATTGGTG GTCAAGCTCT ACATGCTGGA CTTATTGGAT TCGAACATCC AGTAACAGGT GAATATATTG AAAGACATGC TGAATTACCA CAAGACTTTG AAGATTTATT AGATACAATT CGAAAAAGAG ATGCATAA
|
Protein sequence | METYEFNITD KEQTGMRVDK LLPELNNDWS RNQIQDWIKA GLVVANDKVV KSNYKVKLND HIVVTEKEVV EADILPENLN LDIYYEDDDV AVVYKPKGMV VHPSPGHYTN TLVNGLMYQI KNLSGINGEI RPGIVHRIDM DTSGLLMVAK NDIAHRGLVE QLMDKSVKRK YIALVHGNIP HDYGTIDAPI GRNKNDRQSM AVVDDGKEAV THFNVLEHFK DYTLVECQLE TGRTHQIRVH MKYIGFPLVG DPKYGPKKTL DIGGQALHAG LIGFEHPVTG EYIERHAELP QDFEDLLDTI RKRDA
|
| |